 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010925357.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 306aa MW: 34858 Da PI: 4.3805 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010925357.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58.5 | 1.1e-18 | 83 | 137 | 3 | 56 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t++q++ Le+ Fe n+++ e++ +LA+ lg++ rqV +WFqNrRa++k
XP_010925357.1 83 KKRRLTADQVQFLERNFELeNMKLEPERKVQLARDLGIQPRQVAIWFQNRRARWK 137
56689*************66**********************************9 PP
|
| 2 | HD-ZIP_I/II | 129.1 | 1.8e-41 | 83 | 173 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
kkrrl+++qv++LE++Fe e+ kLeperKv+lar+Lg+qprqva+WFqnrRAR+ktkqlEkdyeaLk++ydal+++ ++L +e+e+L++++
XP_010925357.1 83 KKRRLTADQVQFLERNFELENmKLEPERKVQLARDLGIQPRQVAIWFQNRRARWKTKQLEKDYEALKSSYDALTADYDNLLNEKEKLQAKV 173
9******************999******************************************************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MAGRSAYVSS NMAGLLQTGR ISSEAMEALL PPGPSHGEFH GSMPMMNFED VHGSRPEQAC 60
WGPFELEETG DEDLDEGVHQ PAKKRRLTAD QVQFLERNFE LENMKLEPER KVQLARDLGI 120
QPRQVAIWFQ NRRARWKTKQ LEKDYEALKS SYDALTADYD NLLNEKEKLQ AKVLSLTNML 180
LLKGKDVGSS EPIEFNKFAH QLGDLVSNSM CEMERVNAQV TECKQEDISS ANSTVFDSES 240
PHYIDEGAHS MLMEPMDSSN IFEPDRCDLL YAGEVDEVKG CSFLRLEDNL NNYEFPVEDQ 300
SCWFWP
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 131 | 139 | RRARWKTKQ |
