PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010924856.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 273aa    MW: 30227.2 Da    PI: 9.2516
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010924856.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-18105155256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg++++ae Aa a+++a+ kl+ge
  XP_010924856.1 105 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDSAESAAYAYDRAAYKLRGE 155
                     59******9.**********954...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.88E-20104164No hitNo description
PROSITE profilePS5103222.945105162IPR001471AP2/ERF domain
SMARTSM003803.7E-33105168IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-22105163IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-30105163IPR001471AP2/ERF domain
PfamPF008474.6E-13106155IPR001471AP2/ERF domain
PRINTSPR003671.1E-12106117IPR001471AP2/ERF domain
PRINTSPR003671.1E-12144164IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MDGTPETLPP PAFPGEISSA LSEILLSGTD PLDSIFSHLP PPFPAAPEPL GSGVYRYQTE  60
LLRRLATEAR PFSAPFPYHV NPPAWAAADQ NHRLFYGVGP VKKKLYRGVR QRHWGKWVAE  120
IRLPQNRMRV WLGTYDSAES AAYAYDRAAY KLRGEYARLN FPDLRDGGDC PEKLRALGSA  180
VDSKIQAICQ RVERQRRLKR ISESKKGKAK GERRRDEKPS SSSAVAAEGP SETSSSVSAE  240
SLKTAGSTEM EGECSLARLP SFDPELIWEV LAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-19102162263ATERF1
3gcc_A6e-19102162263ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010924856.10.0ethylene-responsive transcription factor ERF061
SwissprotQ9C7W21e-50ERF61_ARATH; Ethylene-responsive transcription factor ERF061
TrEMBLA0A2H3Y0221e-149A0A2H3Y022_PHODC; ethylene-responsive transcription factor ERF061
STRINGXP_008791428.11e-150(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP88282842
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.12e-45ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]