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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010924639.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family |
C3H |
Protein Properties |
Length: 366aa MW: 40767.8 Da PI: 7.6886 |
Description |
C3H family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010924639.1 | genome | OG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-CCCH | 44.4 | 2.7e-14 | 292 | 317 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS
zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26
+ktelC+ + ++G+C+yG++C+FaHg
XP_010924639.1 292 FKTELCNKWEESGECPYGENCQFAHG 317
79***********************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0051511 | Biological Process | negative regulation of unidimensional cell growth |
GO:1901347 | Biological Process | negative regulation of secondary cell wall biogenesis |
GO:0003729 | Molecular Function | mRNA binding |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MSPLGSETVA NRMQQKLLTP TNSDRLRSAI GTAPFLSPDR RFSCPPYFAN DGDSFWPYAS 60 VISTTEETTT RVTQPTGSGS VSLNPSTVSF DEEDPTGTEN RLYLARLTLQ YREIAEHYDL 120 CLSHLQEAAQ EAEALRLENA KLRIANSELA KRLNLLSGKQ NWQIASPAAG GHPILSIVDE 180 FGRLSVGEPP AETSPTSVLA FRENQFARRA TEKRGLPLKS ISVRSNGYLK LNQGVSAANR 240 NDRLRVSSPV MVDSQKVCVG GASKKKGERR GREEDEERGE ALDLEVYNQG MFKTELCNKW 300 EESGECPYGE NCQFAHGITE LRPVIRHPRY KTQICRMILA GDTCPYGHRC HFRHTSPSDC 360 FLLRPS
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