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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010924610.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family |
Trihelix |
Protein Properties |
Length: 276aa MW: 30610.3 Da PI: 10.0025 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010924610.1 | genome | OG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 51.3 | 3e-16 | 22 | 115 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
+W++ e+ aL+ea + +l+rg+l++++W+ev++++ ++r r+ +qCk++++ l+k+yk +k++ ++ +++s++ ++++l+a
XP_010924610.1 22 CWSEGETSALVEAWGDHYLELNRGNLRQKHWQEVADAVnsrrgasASRRPPRTDVQCKNRIDTLKKKYKIEKARISSSDGGATSQWTFYERLDA 115
7***************************************999998888899*************************999***********985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MDGRETAPSR PPNPALPYRE DCWSEGETSA LVEAWGDHYL ELNRGNLRQK HWQEVADAVN 60 SRRGASASRR PPRTDVQCKN RIDTLKKKYK IEKARISSSD GGATSQWTFY ERLDALIGSA 120 APAKKPSPPL ALPLPYHRKG SPLPAAAAAF RPADKRPVAA LAVDDPSFFR RAAAAAAAES 180 AEDEEEEDSG SSSTSGRGGR GAREGNGDGI RQLARAITRF AEIYERVERA KQRQMMELEK 240 QRMEFAKGLE FQRMQIFVDS QVQLEKIKRA KRADSG
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G58630.1 | 2e-36 | sequence-specific DNA binding transcription factors |