PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010924340.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 575aa    MW: 61358 Da    PI: 7.0281
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010924340.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.11.2e-30330388259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+
  XP_010924340.1 330 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRSVLITTYEGNHNHP 388
                     7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-33314390IPR003657WRKY domain
SuperFamilySSF1182908.24E-28322390IPR003657WRKY domain
PROSITE profilePS5081129.815324390IPR003657WRKY domain
SMARTSM007743.7E-37329389IPR003657WRKY domain
PfamPF031066.3E-27331388IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 575 aa     Download sequence    Send to blast
MGTGGGGLSL GISSDSAGFK TGGVMDSFLG GGLKRKSGSV ESEHHFPTSL RCHDEPADGE  60
EKRRVVGEVD FFSDEIRRER ARPDSDSNAP DISIKKEDLT INMGLHLLTT NTGTDQSTMD  120
DGLSVNEDKE SKSDLAAVQA ELGRINQENQ RLKSMLSHAT NNFNSLHMHF IALMQERNQR  180
NGSLQGHEVI DHEKTGDKRS KHEDPTAPRQ FLDLGLASLA GEGSHPTTEG GSQDRSISPP  240
NNAEVLSMDY SLKENYNSKE AVPIDRERSD GRDVRATFRE ESPGKASQSW IPNKAAKLSP  300
SKTSDQEAQE ATMRKARVSV RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG  360
CPVRKQVQRC AEDRSVLITT YEGNHNHPLP PAAKEMASTT SAAANTLLCG SMSSTDGLMN  420
SNFLASSSSM AAISASAPFP TVTLDLTHVS SVAFRRPSTQ FQVPFPNGAA APGLGSTPTT  480
SLPLEFGQTL FNQSKFSGFQ MDRPRVSQPK VDSVRPSSLA DTVSAATAAM AADPNFTAVV  540
AAAITSIIGG GRGGSGAAQT GNSNNNKGSE NGIGN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-22316392176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010924340.10.0probable WRKY transcription factor 31
SwissprotQ9XEC31e-135WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A2H3ZUY20.0A0A2H3ZUY2_PHODC; probable WRKY transcription factor 31
STRINGXP_008800737.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP52653656
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.11e-114WRKY family protein