 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010923870.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
NF-YC |
| Protein Properties |
Length: 247aa MW: 28406.1 Da PI: 4.6848 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010923870.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 160.6 | 2.4e-50 | 72 | 174 | 2 | 101 |
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93
l++fw++q i +tdfknh+lPlarikki+kadedv+mi+aeaPvl+++ace+filelt rsw ++e+nkrrtl+k+dia a+trtd+fdflv
XP_010923870.1 72 LRMFWASQyqeILATTDFKNHSLPLARIKKIMKADEDVRMIAAEAPVLFARACEMFILELTYRSWAQTEDNKRRTLHKNDIAGAITRTDVFDFLV 166
89****996666689******************************************************************************** PP
NF-YC 94 divprdel 101
d+vpr++l
XP_010923870.1 167 DVVPREDL 174
*****987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MDNPGQGQPP VTDAVHIPYI DMPYQDNQMM GSNVPISSSQ LTTAASQVQL AQHQLFYQRI 60
QKQQLQQLDQ TLRMFWASQY QEILATTDFK NHSLPLARIK KIMKADEDVR MIAAEAPVLF 120
ARACEMFILE LTYRSWAQTE DNKRRTLHKN DIAGAITRTD VFDFLVDVVP REDLKEEVNA 180
NDSLAHYYAS PQVGSLGMIM NKPGVDQDLL YAQMPQPYVP QQFWEQQQTI QQQQPQHQEQ 240
QPGEDLL
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}. |
| Publications
? help Back to Top |
- Hwang YH, et al.
Functional conservation of rice OsNF-YB/YC and Arabidopsis AtNF-YB/YC proteins in the regulation of flowering time.
Plant Cell Rep., 2016. 35(4): p. 857-65
[PMID:26754793] - Liu X, et al.
The NF-YC-RGL2 module integrates GA and ABA signalling to regulate seed germination in Arabidopsis.
Nat Commun, 2016. 7: p. 12768
[PMID:27624486] - Myers ZA, et al.
NUCLEAR FACTOR Y, Subunit C (NF-YC) Transcription Factors Are Positive Regulators of Photomorphogenesis in Arabidopsis thaliana.
PLoS Genet., 2016. 12(9): p. e1006333
[PMID:27685091] - Gnesutta N,Saad D,Chaves-Sanjuan A,Mantovani R,Nardini M
Crystal Structure of the Arabidopsis thaliana L1L/NF-YC3 Histone-fold Dimer Reveals Specificities of the LEC1 Family of NF-Y Subunits in Plants.
Mol Plant, 2017. 10(4): p. 645-648
[PMID:27871811] - Tang Y, et al.
Arabidopsis NF-YCs Mediate the Light-Controlled Hypocotyl Elongation via Modulating Histone Acetylation.
Mol Plant, 2017. 10(2): p. 260-273
[PMID:27876642] - Zhao H, et al.
The Arabidopsis thaliana Nuclear Factor Y Transcription Factors.
Front Plant Sci, 2016. 7: p. 2045
[PMID:28119722] - Gnesutta N, et al.
CONSTANS Imparts DNA Sequence Specificity to the Histone Fold NF-YB/NF-YC Dimer.
Plant Cell, 2017. 29(6): p. 1516-1532
[PMID:28526714]
|
