PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010923736.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 288aa    MW: 32075.8 Da    PI: 6.8015
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010923736.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.91.1e-1218771669
        trihelix 16 emeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69
                    ++e++ r+g         + +W++v +++++ g+ rs++qC+++w+nl +++kk+++ + 
  XP_010923736.1 18 SIESEGREGGsssssrPSEMRWKWVEDYCWRYGCYRSQNQCNDRWDNLMRDFKKVRAYDM 77
                    33333333213333338999***********************************98665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.5E-83076No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MVLIEAKKID NERRMKRSIE SEGREGGSSS SSRPSEMRWK WVEDYCWRYG CYRSQNQCND  60
RWDNLMRDFK KVRAYDMSLG VEEGDRLSYW KLERHERKER NLPSNLLPEI YEALIEAVDR  120
RGVEGVSGST SNMAELGGEE GHMGSISASL PPVMPGPTSQ APPPLSPTHA LPQAQAAGTI  180
DSDDDEHSNS PERKRRRGEG SSSKNSSHKL SSAISKSASI LAEAFQASED KEERRHKDLM  240
RIEERKAKIE QSKAEISIQS MEGLATAINQ LASSILGSLA DKGPAAPK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192196RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029121186.10.0trihelix transcription factor ASR3
TrEMBLA0A2H3XQR91e-174A0A2H3XQR9_PHODC; trihelix transcription factor ASR3
STRINGXP_008787373.11e-174(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32943571
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.12e-49Trihelix family protein