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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010923662.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family |
MYB_related |
Protein Properties |
Length: 334aa MW: 37098.9 Da PI: 10.0045 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010923662.1 | genome | OG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 35.8 | 1.8e-11 | 39 | 89 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
+++WT+eE+ l +v ++G g W+tI + R+ ++k++w++
XP_010923662.1 39 KQKWTAEEEAALRAGVVKHGAGKWRTILKDPEfsavlRLRSNVDLKDKWRN 89
79***********************************99***********9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006334 | Biological Process | nucleosome assembly |
GO:0006357 | Biological Process | regulation of transcription from RNA polymerase II promoter |
GO:0009651 | Biological Process | response to salt stress |
GO:0009723 | Biological Process | response to ethylene |
GO:0009733 | Biological Process | response to auxin |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009739 | Biological Process | response to gibberellin |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0000786 | Cellular Component | nucleosome |
GO:0005730 | Cellular Component | nucleolus |
GO:0003691 | Molecular Function | double-stranded telomeric DNA binding |
GO:0033613 | Molecular Function | activating transcription factor binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0070491 | Molecular Function | repressing transcription factor binding |
GO:1990841 | Molecular Function | promoter-specific chromatin binding |
Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MICDLFICLR IDVGVHVSGF ASLDSSGRVL WLFSMGAPKQ KWTAEEEAAL RAGVVKHGAG 60 KWRTILKDPE FSAVLRLRSN VDLKDKWRNM SVTANGWGSR EKARIALKKS RQISKHNDNP 120 KVLTTEVEDI DNEIVDAKHL AMSSESLKFT GPKRSISRLD NLIMEAITNL KEPTGSNKTA 180 IAMYIEEQYW LPPDFKQLLS AKLKVLTASG KLIKVKRKYR ITPSSAFSER RNSKVSLLEE 240 MKLEPPKLER DDIKLLTKAQ VDAELAQMRN LTAEEAAAVA AKAVSEAEVA IKEAEEAARE 300 AEVAEAEAEA AKAFAEAAIS TLKRRNAAKL MIRV
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Functional Description ? help
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Source |
Description |
UniProt | Binds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand. {ECO:0000250}. |