 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010923489.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
bZIP |
| Protein Properties |
Length: 456aa MW: 48832.2 Da PI: 4.8407 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010923489.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 48.6 | 1.7e-15 | 245 | 299 | 3 | 57 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
+ kr rr+ +NRe+ArrsR+RK+a + eLe v +L eN++L k+ +++++
XP_010923489.1 245 DAKRVRRMLSNRESARRSRRRKQAHLSELEAQVSQLRVENSSLLKRFTDINQKYN 299
689*****************************************99999888876 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0071215 | Biological Process | cellular response to abscisic acid stimulus |
| GO:0071333 | Biological Process | cellular response to glucose stimulus |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042802 | Molecular Function | identical protein binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 456 aa
Download sequence Send
to blast |
MERVFSVDEM SDSFWAAAAG LPSPAAGGRP RGLMNRSPSE WYFEKFLEVA EEEAAIPRTT 60
PPPPANPNLD PDYNRNPPPA SAVASNSSGG GRKDGGRGGE DELVEIKEPA VVAAAAPPQG 120
PPSDPPADVD PKEYVALLKQ RLDLYCAAVA MCRGSGVNSP DSSSLDSKSL SLDASQLGSQ 180
GPVPGNGSKM QQKAGSGPTG GEAPPVMQNL GVQGRPATSG SSREQSDDEE FEGEAETTEN 240
MDPADAKRVR RMLSNRESAR RSRRRKQAHL SELEAQVSQL RVENSSLLKR FTDINQKYND 300
AAVDNRVLKA DVETLRAKVK MAEETVKRVT GVNLLYPNIP DISTIGMPFS GSPSDATADT 360
SVPIQDNPNH FFQPPSHDQR INTCLPEIAP APPVEDVMHG AVVGGKMGRT ASMQRVASLE 420
HLQKRMYGGP SSCEPVQWDA AAWDPETSVS NKQNQV
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 259 | 266 | RRSRRRKQ |
| 2 | 261 | 266 | SRRRKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that binds to the DNA specific sequence 5'-GCCACGT[AC]AG-3' found in the alpha-globulin gene promoter (PubMed:9049271, PubMed:11572990). Does not bind to promoters of other major storage genes such as glutelin, prolamin and albumin (PubMed:9049271). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:11572990, ECO:0000269|PubMed:9049271}. |
| Publications
? help Back to Top |
- Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
J. Biol. Chem., 2001. 276(17): p. 14139-52
[PMID:11133985] - Yang D,Wu L,Hwang YS,Chen L,Huang N
Expression of the REB transcriptional activator in rice grains improves the yield of recombinant proteins whose genes are controlled by a Reb-responsive promoter.
Proc. Natl. Acad. Sci. U.S.A., 2001. 98(20): p. 11438-43
[PMID:11572990] - Cheng S,Wang Z,Hong M
Rice bZIP protein, REB, interacts with GCN4 motif in promoter of Waxy gene.
Sci. China, C, Life Sci., 2002. 45(4): p. 352-60
[PMID:18759022]
|
