PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010923470.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bHLH

Protein Properties

Length: 269aa MW: 30307.3 Da PI: 6.5128

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010923470.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.1	3.3e-08	104	148	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +rEr RR+r+ ++++ Lr +l ++ K +K ++ + A Y+++L XP_010923470.1 104 HLMRERERRERLSQGYADLRHMLCTR-----SKGDKNSVIQAAAAYLQEL 148 789**********************7.....5888999999999999988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	6.94E-12	99	171	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	11.795	99	148	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.2E-5	104	148	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.4E-8	104	166	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	2.3E-6	105	154	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence Send to blast
MDPFPFRLQG DDEYQEYLNL AFSPPLSFDL LPAISNPQLP PQSAFVDYTT FNGETSSQSS 60 GCRQQQTGGR NIHRRVIGFL RTIPMATRQE SFRDVPEASK EFRHLMRERE RRERLSQGYA 120 DLRHMLCTRS KGDKNSVIQA AAAYLQELKG ARDVLRKCNE ELEEMVAVNR RMVEGATIKL 180 RVMNPSSTID SLIGALQRIR EMELEVASIE ANLCSQELSA VVNLKSKNVA IAEVEGAMEC 240 ALREAEKSSH HLSSQQCNFS LSCHVENAP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010923470.1	0.0	transcription factor BHLH148 isoform X2
TrEMBL	A0A2H3XN55	1e-127	A0A2H3XN55_PHODC; transcription factor BHLH148-like
STRING	XP_008786099.1	1e-127	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5940	34	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	9e-12	bHLH family protein