PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010923444.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 412aa    MW: 43191.4 Da    PI: 8.1974
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010923444.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.79.4e-22287350164
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                     e+elkrerrkq+NRe+ArrsR+RK++e++eL +kv+eL +eN+aL  e+e+lkk +  lk+e+e
  XP_010923444.1 287 ERELKRERRKQSNRESARRSRLRKQQECDELSRKVAELNSENSALTLEVENLKKFCRDLKAENE 350
                     89**********************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.3E-739111IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.7E-8126257No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-16282347No hitNo description
PfamPF001703.0E-19287350IPR004827Basic-leucine zipper domain
SMARTSM003386.7E-20287351IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.036289352IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-10290346No hitNo description
CDDcd147027.28E-22292343No hitNo description
PROSITE patternPS000360294309IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MGSTEETSTA GAAAEKPSRK AAASTSPAPA AAPPPSSSRE SPTPTQPPLQ VAAHVFSDWA  60
ASLQAFYGSG AAATAPYPFA WGTPRLESSY GPPITHSPMY PNGAVYSHPS MAVGMAYPTT  120
DPSDGKNKGS SGNAGGSPGK SGDGSKMTSS AAENSSRSGD SGSEGSSDTR DDDAKPKDLS  180
SSKKRSYGNM MAEVDTPQPI TAAQYGGTVV EPSYSSRGRS ATKLPVSAPG RIVLTSPPTN  240
LNIGMDLWNA SHAGAVPVKT RPTEAGIATA TGRWDGVTAE QQRIQDEREL KRERRKQSNR  300
ESARRSRLRK QQECDELSRK VAELNSENSA LTLEVENLKK FCRDLKAENE SLEAGLTHFY  360
GAGMVSALGS KVESSAVPSV GGDGSDHVHQ SPVDSNRNKG KFYTGIDNPN QL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1303309RRSRLRK
2303310RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010923444.10.0DNA-binding protein EMBP-1 isoform X1
TrEMBLA0A2H3XN780.0A0A2H3XN78_PHODC; G-box-binding factor 1-like isoform X1
STRINGXP_008786126.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.12e-40G-box binding factor 1