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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010923034.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | EIL | ||||||||
Protein Properties | Length: 607aa MW: 66961.2 Da PI: 5.9035 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 224.5 | 6.8e-69 | 26 | 306 | 2 | 285 |
XXXXXXXXXXXXXXXXXXXXXX...XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqll.edkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 e++ +m ++++ k ++qll e++ ++++ +k+ + +e arr+k+ r i M k ++ aqG+ +gi+ + gk +s++Lr+WW XP_010923034.1 26 EMEMKMLEERIQSD--K-ASLQLLkEKMRHQANPQKQCELQELARRRKARRLHNKISNSMAKLVREGLAQGYCFGIVTNDGKSIVASSENLREWW 117 66666766666666..2.22333303344447888999********************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 kekv+f n+p ai k ++ il ++s++++ + s + l++l DT l++ salm+hcdppqrrfp ekgv+pPWWP+ +e+ww++lg++ dq XP_010923034.1 118 KEKVKFLENAPRAIEKFEKRSPILLSSSHNNS-EISVPGALKQLTDTILSAAISALMRHCDPPQRRFPIEKGVAPPWWPSMTEEWWPTLGFPVDQ 211 *****************999999998888877.78899********************************************************* PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXX.XXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkv.tlsceqkedv 284 ++ppykkphdlkk k+svL a i h+ p+ ++irel+ qsk+l+d+ms kes +svl+q +++ + ++++s +++ +v s ++dv XP_010923034.1 212 SPPPYKKPHDLKKGCKISVLMAMIMHLFPDTQRIRELVSQSKSLKDRMSPKESKLFSSVLRQIRRLHQPMQQSSAI-PDEDDDVgSNSRAGQYDV 305 **************************************************************98877655555543.334444413444556777 PP X CS EIN3 285 e 285 e XP_010923034.1 306 E 306 6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.9E-74 | 32 | 273 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.1E-51 | 148 | 282 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 6.41E-45 | 156 | 276 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 607 aa Download sequence Send to blast |
MERHTMPSTS AASSDALLEA GATDDEMEMK MLEERIQSDK ASLQLLKEKM RHQANPQKQC 60 ELQELARRRK ARRLHNKISN SMAKLVREGL AQGYCFGIVT NDGKSIVASS ENLREWWKEK 120 VKFLENAPRA IEKFEKRSPI LLSSSHNNSE ISVPGALKQL TDTILSAAIS ALMRHCDPPQ 180 RRFPIEKGVA PPWWPSMTEE WWPTLGFPVD QSPPPYKKPH DLKKGCKISV LMAMIMHLFP 240 DTQRIRELVS QSKSLKDRMS PKESKLFSSV LRQIRRLHQP MQQSSAIPDE DDDVGSNSRA 300 GQYDVEVGDD GFDDDMMSSS AVGGNIFDLN NSGGMEGIPV SVALESNQRM EFAQHSTSLN 360 HDWRNAPQNT WPSCNVVAQN PQVTGVAQYP QVIGLAHQNQ VTGAAQYPQI TGLAQNSQVT 420 GLSPLGSDFG PVDVSGLGNP GDEQRLIGGM MRFSSDDINQ GSNLVVQQGP ETVSNDMNVP 480 QPIFTSSPGI YQLTIAGNSY LFQQIPSMDI SPLQQPTGMQ RSHLGQGVGS NHQMIQANNL 540 NQPQVYPNED ISFGPRFGTQ PNCANLNLDH ATIAGSSAVE DAGAFSGRVE ERMPMQDSYS 600 WTTNFGC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 1e-47 | 152 | 273 | 1 | 122 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 1e-47 | 152 | 273 | 1 | 122 | Protein ETHYLENE INSENSITIVE 3 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_029120761.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
TrEMBL | A0A2H3Y2N2 | 0.0 | A0A2H3Y2N2_PHODC; protein ETHYLENE INSENSITIVE 3-like | ||||
STRING | XP_008792545.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP50808 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 7e-81 | EIL family protein |