PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010922488.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 469aa    MW: 51259.4 Da    PI: 8.6635
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010922488.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.84.7e-33189245360
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh+k
  XP_010922488.1 189 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSF-DGQIAEIVYKGEHNHPK 245
                     9***************************************.***************85 PP
2WRKY95.73.3e-30388446260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                      Dg++WrKYGqK+vkg+ +prsYYrCt+++C+++k ver+++d   +++tYeg+Hnhek
  XP_010922488.1 388 ADGFHWRKYGQKVVKGNSYPRSYYRCTTPKCNARKYVERASDDSGSFVTTYEGKHNHEK 446
                     6********************************************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-29174246IPR003657WRKY domain
SuperFamilySSF1182906.02E-26186246IPR003657WRKY domain
SMARTSM007743.2E-37187245IPR003657WRKY domain
PROSITE profilePS5081124.122189246IPR003657WRKY domain
PfamPF031061.1E-25189244IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-31373447IPR003657WRKY domain
SuperFamilySSF1182902.75E-27381447IPR003657WRKY domain
PROSITE profilePS5081130.859382447IPR003657WRKY domain
SMARTSM007746.9E-35387446IPR003657WRKY domain
PfamPF031062.7E-24389445IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MRDAEKIVVA KPVPSRPCSN LRSFSELLAG AMNASPATSF AEATVAIRPK TVRFKPTTNA  60
ALADVSSSDV ISKSAACSLP DKASTTTSKA EHNSTILYKP VAKVVSRTTA ALLANLGNFD  120
ASHQLTTATV LEQEKNQFQC LPTLNCHQDS SSHMEMDHIY EPSNSAPPAT EQDARIQQPT  180
TSGDRRSYDG YNWRKYGQKQ VKGSEYPRSY YKCTHPNCPV KKKVERSFDG QIAEIVYKGE  240
HNHPKPQPPK RLSLGSQGQT FVSEGRGRES GHRLWNGHLV EGNASEEQVD NDNETSFPDT  300
SSFLGQTQFS HDPLLATSYN SVTKNPDTTG GPSGTSEVGD GTASLDNDKP NYKRRKTEDQ  360
VSGAGAVTEG VAEPHSATQT SIEADVSADG FHWRKYGQKV VKGNSYPRSY YRCTTPKCNA  420
RKYVERASDD SGSFVTTYEG KHNHEKPTRK TNLAVSHHDA GGLSKSRHN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A8e-28189447677Probable WRKY transcription factor 4
2lex_A8e-28189447677Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010922487.10.0WRKY transcription factor 44 isoform X1
RefseqXP_010922488.10.0WRKY transcription factor 44 isoform X1
RefseqXP_029120636.10.0WRKY transcription factor 44 isoform X1
RefseqXP_029120637.10.0WRKY transcription factor 44 isoform X1
RefseqXP_029120638.10.0WRKY transcription factor 44 isoform X1
TrEMBLA0A2H3XH140.0A0A2H3XH14_PHODC; WRKY transcription factor 44-like isoform X1
STRINGXP_008783653.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.19e-91WRKY family protein