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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_010921105.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
NAC |
| Protein Properties |
Length: 389aa MW: 42133.7 Da PI: 9.8106 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010921105.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 172.1 | 1.8e-53 | 16 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++
XP_010921105.1 16 LPPGFRFHPTDEELVVHYLKKKAASVPLPV-TIIAEVDLYKFDPWELPGKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTS 109
79****************************.89***************999999***************************************99 PP
NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
++++vg+kk Lvfy g+ pkg kt+W+mheyrl
XP_010921105.1 110 gGTQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 143
77788***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 389 aa
Download sequence Send
to blast |
MESTDSSGSQ QQQPQLPPGF RFHPTDEELV VHYLKKKAAS VPLPVTIIAE VDLYKFDPWE 60
LPGKANFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPILTSG GTQKVGVKKA 120
LVFYGGKPPK GIKTNWIMHE YRLADSSPSS SARPPGGDVG SKKGSLRLDD WVLCRIYKKN 180
SSSNNNGRLT DRDKEDSMDG MLAPPALTPH RAIGTQTNPR PQPQRAPNNY TALLGNDETF 240
FEGLLTTEDG LAANPMTQFA GAPRAKLDLS TVQTNSGTLA PKRPLTSPYW SDGGMGTPPP 300
TKRFQGCNHG SSGNSTTTNN NTSSGSNSSA TTNNNNNSNN NHGGHTITAL LNQIPQGTAY 360
QPQTILSSLG DGSAIFRQPY QLSGMNWSS
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-76 | 13 | 185 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-76 | 13 | 185 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-76 | 13 | 185 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-76 | 13 | 185 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-76 | 13 | 185 | 17 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-76 | 13 | 185 | 17 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-76 | 13 | 185 | 17 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-76 | 13 | 185 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-76 | 13 | 185 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-76 | 13 | 185 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-76 | 13 | 185 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-76 | 13 | 185 | 17 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 1e-76 | 13 | 185 | 14 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-76 | 13 | 185 | 14 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype. {ECO:0000269|PubMed:17124321}. |
