PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010920938.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 487aa    MW: 54885.1 Da    PI: 7.3208
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010920938.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.78.2e-31101154255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++h+kSHLQ+YR 
  XP_010920938.1 101 PRLRWTPDLHLAFVNAVEKLGGQERATPKLVLQMMNVRGLSIAHIKSHLQMYRN 154
                     8****************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.1597157IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.4E-2897155IPR009057Homeodomain-like
SuperFamilySSF466891.2E-1399155IPR009057Homeodomain-like
TIGRFAMsTIGR015573.0E-23101156IPR006447Myb domain, plants
PfamPF002491.9E-9102153IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    Send to blast
MEIGGKVVIE IHDDDERSTG MSNQLVENKR PRPALDLTEE VAENGIEERE DKGYENGERT  60
AETEGERSST DSRSTDNNID TIEGSEEQAS AVRQYHRSKM PRLRWTPDLH LAFVNAVEKL  120
GGQERATPKL VLQMMNVRGL SIAHIKSHLQ MYRNKKLDDS DQRKRIFPSS AVFSFLDANR  180
QYCSDLFHQK MIPSQPLRMG GGGLFSARFD LEQSRYHHLL QRSQAQKTHH DLKNFNVALM  240
AFNQQMTPAT HPLSDQGQAG GLVHDLIFRK DGQPSASHLF EARNAITGNL KAHQVLGERR  300
RLPGDMAINQ GTNTRANGRY DRIGGSSRFV PSGSPFRLAS TNRNFKWSTS SSFIHNYNQI  360
QPNSRDPTVI SDNLMPRSEA PHQLENPTYQ PKRKFEDIIQ GSEALVAVKK RLIAARERDW  420
GTDLQLNLSN SANNGTGGNE GVEAEKVDDF LLLSLGPPMS ENRVEPSKTE EDAAKTEIQF  480
FPKEDRK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-17102156357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-17102156357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-17102156357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-17102156357Protein PHOSPHATE STARVATION RESPONSE 1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12832KRPRP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029119104.10.0uncharacterized protein LOC105044662
TrEMBLA0A3Q0I0E20.0A0A3Q0I0E2_PHODC; uncharacterized protein LOC103706912
STRINGXP_008789400.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42660.15e-36G2-like family protein