PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010920933.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 297aa MW: 31790.3 Da PI: 7.4035

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010920933.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	128	2.7e-40	41	102	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e++lkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss XP_010920933.1 41 PEQNLKCPRCDSTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNKRSSS 102 7899******************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	2.0E-33	43	99	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	4.0E-23	45	94	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.553	45	99	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	47	83	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence Send to blast
MEISNGDHQV MATLPLEEVL TGCPKTQQQQ QQQERKPRPQ PEQNLKCPRC DSTNTKFCYY 60 NNYSLSQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKNKRS SSSTSKRAQD QALATNSNPP 120 LPTLLPPPLS YDPSDLSLAF ARLHKPPTGG QLGLDDHDSF LLGNPNSGHI PTGTPGFLDI 180 LRGGLFDTTT TTSGFHNLYY GFGGHGSVEQ VEDSVAGEEA VLPFDGGLTG ATTATTSSTP 240 TTSQGSCKAA DGGESKMFMG LQWQVGGGGN MAAMDPGRDY WNGGGSSWPG LINSSLM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010920933.1	0.0	dof zinc finger protein DOF3.2 isoform X2
TrEMBL	A0A2H3Y2Q3	1e-175	A0A2H3Y2Q3_PHODC; dof zinc finger protein DOF3.2
STRING	XP_008792304.1	1e-176	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	2e-30	TARGET OF MONOPTEROS 6