PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010920932.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 315aa MW: 34022.2 Da PI: 8.5455

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010920932.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.9	3e-40	59	120	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e++lkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss XP_010920932.1 59 PEQNLKCPRCDSTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNKRSSS 120 7899******************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	2.2E-33	61	117	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	8.0E-23	63	112	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.553	63	117	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	65	101	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence Send to blast
MNPLQIRSNF PCFLCVQAKH IDRFVRKVMA TLPLEEVLTG CPKTQQQQQQ QERKPRPQPE 60 QNLKCPRCDS TNTKFCYYNN YSLSQPRYFC KGCRRYWTKG GSLRNVPVGG GCRKNKRSSS 120 STSKRAQDQA LATNSNPPLP TLLPPPLSYD PSDLSLAFAR LHKPPTGGQL GLDDHDSFLL 180 GNPNSGHIPT GTPGFLDILR GGLFDTTTTT SGFHNLYYGF GGHGSVEQVE DSVAGEEAVL 240 PFDGGLTGAT TATTSSTPTT SQGSCKAADG GESKMFMGLQ WQVGGGGNMA AMDPGRDYWN 300 GGGSSWPGLI NSSLM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_029120278.1	0.0	dof zinc finger protein DOF3.2 isoform X1
TrEMBL	A0A2H3Y2Q3	1e-167	A0A2H3Y2Q3_PHODC; dof zinc finger protein DOF3.2
STRING	XP_008792304.1	1e-168	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4704	32	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	8e-30	TARGET OF MONOPTEROS 6