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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010920477.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family |
MYB |
Protein Properties |
Length: 257aa MW: 29050.8 Da PI: 5.9156 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010920477.1 | genome | OG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 57.3 | 3.5e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l+ +++++G g+W++ ++ g+ R++k+c++rw +yl
XP_010920477.1 14 KGPWTPEEDQILIAYIQRYGHGNWRALPKQAGLLRCGKSCRLRWVNYL 61
79******************************99************97 PP
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2 | Myb_DNA-binding | 56.9 | 4.7e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T+eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l
XP_010920477.1 67 RGNFTQEEEETIINLHEKLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
89********************.*********.************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 257 aa
Download sequence Send
to blast |
MVRAPCCEKM GLKKGPWTPE EDQILIAYIQ RYGHGNWRAL PKQAGLLRCG KSCRLRWVNY 60 LRPDIKRGNF TQEEEETIIN LHEKLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRVKPNQ 120 VAQEAKKESK HTPMQLSSGF MHPILDDPRL LAGSPDQAHS DFSCTATDSS TISRETTNNV 180 GVKEESFSSE EFPVIDESFW LETLSMDNCV EQIDFTGPTY GPLGEAFGSF GASNNDDMDF 240 WLRVFVEAGD LLALPPI
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator involved in cold stress response (PubMed:14675437, PubMed:20807373, PubMed:22246661). Regulates positively the expression of genes involved in reactive oxygen species (ROS) scavenging such as peroxidase and superoxide dismutase during cold stress. Transactivates a complex gene network that have major effects on stress tolerance and panicle development (PubMed:20807373). {ECO:0000269|PubMed:14675437, ECO:0000269|PubMed:20807373, ECO:0000269|PubMed:22246661}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold stress. {ECO:0000269|PubMed:14675437, ECO:0000269|PubMed:20807373, ECO:0000269|Ref.2}. |