 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_010920061.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
Family |
Trihelix |
Protein Properties |
Length: 308aa MW: 34223.6 Da PI: 10.2852 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010920061.1 | genome | OG | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 51.2 | 3.4e-16 | 22 | 115 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
+W++ e+ aL+ea ++ +l+rg+l++++W+ev++++ ++r r+ +qCk++++ l+k+yk +k++ ++ s+++++d+l+a
XP_010920061.1 22 CWSEGETSALVEAWGDRYLELNRGNLRQKHWQEVADAVnsrrgasASRRPPRTDVQCKNRIDTLKKKYKIEKARITTSDGPAASQWAFYDRLDA 115
7***************************************999998888899************************99999999*******985 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MDGRETAPSR PPNPALPYRE DCWSEGETSA LVEAWGDRYL ELNRGNLRQK HWQEVADAVN 60 SRRGASASRR PPRTDVQCKN RIDTLKKKYK IEKARITTSD GPAASQWAFY DRLDALIGSS 120 APAKKPSPPL ALPLSYHRKG SPLPAATAAA AAAAAAAAAR PSEKRPVAAI AVDNSSFFRR 180 AAAAAAAEAV EDDEEDDPGS SARSSSRSGR GSRGAKEGEG DGIRQLARAI MRFAEIYERV 240 EGAKQRQMME LEKQRMEFAR GLEIQRMQIF VDSQVQLEKI KRAKRADVVD ELLFIDWRRR 300 WFSRKLLC
|
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT3G58630.1 | 3e-35 | sequence-specific DNA binding transcription factors |