PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010920061.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 308aa    MW: 34223.6 Da    PI: 10.2852
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010920061.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.23.4e-1622115187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     +W++ e+ aL+ea  ++  +l+rg+l++++W+ev++++       ++r   r+ +qCk++++ l+k+yk +k++      ++ s+++++d+l+a
  XP_010920061.1  22 CWSEGETSALVEAWGDRYLELNRGNLRQKHWQEVADAVnsrrgasASRRPPRTDVQCKNRIDTLKKKYKIEKARITTSDGPAASQWAFYDRLDA 115
                     7***************************************999998888899************************99999999*******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.0E-2720116No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MDGRETAPSR PPNPALPYRE DCWSEGETSA LVEAWGDRYL ELNRGNLRQK HWQEVADAVN  60
SRRGASASRR PPRTDVQCKN RIDTLKKKYK IEKARITTSD GPAASQWAFY DRLDALIGSS  120
APAKKPSPPL ALPLSYHRKG SPLPAATAAA AAAAAAAAAR PSEKRPVAAI AVDNSSFFRR  180
AAAAAAAEAV EDDEEDDPGS SARSSSRSGR GSRGAKEGEG DGIRQLARAI MRFAEIYERV  240
EGAKQRQMME LEKQRMEFAR GLEIQRMQIF VDSQVQLEKI KRAKRADVVD ELLFIDWRRR  300
WFSRKLLC
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029120808.10.0trihelix transcription factor ASIL2 isoform X1
TrEMBLA0A2H3XVI31e-150A0A2H3XVI3_PHODC; trihelix transcription factor ASIL2-like
STRINGXP_008789387.11e-150(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20653279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-35sequence-specific DNA binding transcription factors