PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010918447.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 480aa    MW: 51811.6 Da    PI: 8.3179
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010918447.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-19229279256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  XP_010918447.1 229 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAFKLRGE 279
                     59******9.**********955...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.02E-32228288No hitNo description
SMARTSM003808.8E-40229292IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-22229287IPR016177DNA-binding domain
PROSITE profilePS5103222.932229286IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.5E-32229287IPR001471AP2/ERF domain
PfamPF008472.6E-12230279IPR001471AP2/ERF domain
PRINTSPR003671.1E-10230241IPR001471AP2/ERF domain
PRINTSPR003671.1E-10252268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009651Biological Processresponse to salt stress
GO:2000070Biological Processregulation of response to water deprivation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MEGSGKSGGS SEKAVGGSGG RRQKGKGPRG LKLMMTEGAA QQRTPVFEEA SAASFRPLKK  60
IRSPDRRQYS PSSSESKPSI SSPSSSNLPT PTPTGTTTPA SSLHPPLSSR HIFPFAYDNS  120
QPILDTNLLP LFGFNQYQQP QQQMLSFAHN NSYQMGAYPP LPPFLAAAAG TQQQQRYQEQ  180
LLRYWSETLN LSPRGMMNRL AGQPGGGSHP YSALFRPPML PAASTPTKLY RGVRQRHWGK  240
WVAEIRLPRN RTRLWLGTFD TAEDAALAYD REAFKLRGEN ARLNFPNLFL GQGRAGAGAG  300
GSSSRDGASC SSSSSSAPAT PDQVQAQTQH HQQHRDIPRN DTQLQSPSTP VVSAEAAPVS  360
TEAKWSMPED CPSGLCEPPP SLGSMAAMPQ SSAPELVWGE AEEAWFSTFG PGSSVWDDVD  420
GANRLLLQSR LTTIPESEMD GSNAAESTQP PTATMACQDF TTTSSPDPSH PPSMFMWKDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-20228286463ATERF1
3gcc_A4e-20228286463ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029119741.10.0ethylene-responsive transcription factor RAP2-4
TrEMBLA0A2H3X7M40.0A0A2H3X7M4_PHODC; ethylene-responsive transcription factor ERF054-like
STRINGXP_008779564.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36913268
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.16e-39ERF family protein