PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010918298.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family GRF
Protein Properties Length: 527aa    MW: 56508.9 Da    PI: 7.5548
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010918298.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC789.5e-25176220145
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                     d+epgrCrRtDGKkWRCsr++ +++k+CErHlhrgr rsrk++e 
  XP_010918298.1 176 DPEPGRCRRTDGKKWRCSRDAAPDQKYCERHLHRGRPRSRKPVEV 220
                     79****************************************985 PP
2QLQ46.11.5e-16112144234
             QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 
                     +FT aQ+q+L +Q+l+yK+++a++PvP++Ll++
  XP_010918298.1 112 PFTSAQWQELQRQALIYKHIIASVPVPADLLFP 144
                     8*****************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009511.4E-8111147IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088806.3E-12112144IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166619.13112147IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.724176220IPR014977WRC domain
PfamPF088791.1E-20177219IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
METGVGLGDK RERKEHEESL GLRFACGSDS TSFAPQKLIR TDGFPFLPSC TTRDGSSVPT  60
STPFLSSGPT LFLNDAYDGG RALQPFPTAF RSPGVGMGVG GGASAAALRA FPFTSAQWQE  120
LQRQALIYKH IIASVPVPAD LLFPSSPSHH LLPNQTVVVG RGAAGAFNLR FSSNTDPEPG  180
RCRRTDGKKW RCSRDAAPDQ KYCERHLHRG RPRSRKPVEV SKTKPITSTA PPPAAVSTNS  240
STIVTTTAAT TSISKPFPSQ SSGFFPKDEL KFPFQPLEPN KEPRCLDWIK GNNEEMESNL  300
QWELMHSKTG LSSSSTPILQ NYDDQLNSNY TAFLNPDLCS LEEDTMGDHR ETPRSFIDAW  360
STENPAATTK TGNLTSVPTG GELPLSTLTL SMSGVEEGGD HQIQMGLGVG DTLVKTYPSG  420
WIASASPGGP LGEVLRTSNA TSPRQGFGAD DGRDSGSRRL INPLSDGFRG SHEASPQESP  480
TRLASSPSGV LQKAMVSLSD SSSSSSPTFA AASRSQIALQ WMNQTKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010918299.10.0growth-regulating factor 7
TrEMBLA0A2H3ZDG90.0A0A2H3ZDG9_PHODC; growth-regulating factor 7-like isoform X1
STRINGXP_008811877.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2255846
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.12e-34growth-regulating factor 2