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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010918201.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
bHLH |
| Protein Properties |
Length: 324aa MW: 36524.3 Da PI: 4.8487 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010918201.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 36.1 | 1.1e-11 | 159 | 201 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++ErrRR+r+N++++ Lr+++Pk +K++ +iL +++Y+k+L
XP_010918201.1 159 MAERRRRKRLNDRLSLLRSVVPKI-----TKMDRTSILGDTIDYVKEL 201
79*********************7.....6****************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MGMDEQSLLQ ELFAPWRQTS EPNCFQGGVD CFQGTACPVS PNYAAFEELV LQEEPNFDCL 60
NEVYRPFGSG FHSTAPELQS PCTMMTHSTI SCSTQENEEI GVIHEGNHST WYQGQSIWKV 120
EPMQTMDNHL VFGGTGSSCL ERKNSRLKKV DGLPSKNLMA ERRRRKRLND RLSLLRSVVP 180
KITKMDRTSI LGDTIDYVKE LLERIKSLQD EIKVGQDQLN LLDTFNGVNP NEMLPRISPK 240
FNVERRERDT RIEISCAAKP GSLLSTVYTL EALGLEIQQC VASCFSDFGM QASCSEDKEQ 300
RAFISSEEME QALFSTAVYG GKYV
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 160 | 167 | ERRRRKRL |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
| Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
Differentiation, 2010. 80(1): p. 1-8
[PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Sharma N, et al.
NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis.
Development, 2016. 143(4): p. 682-90
[PMID:26758694] - Chen YS, et al.
Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
Plant Mol. Biol., 2017. 93(3): p. 299-311
[PMID:27866313] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470]
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