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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010918188.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family |
bHLH |
Protein Properties |
Length: 493aa MW: 54906.7 Da PI: 4.8479 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010918188.1 | genome | OG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 41.6 | 2.2e-13 | 294 | 337 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+ Er+RR+++N+++ Lr+l+P++ +K + a+i+ A+eYIk+L
XP_010918188.1 294 FATERQRREQLNEKYKALRSLVPNP-----TKSDRASIVGDAIEYIKEL 337
688**********************.....9****************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009555 | Biological Process | pollen development |
GO:0048658 | Biological Process | anther wall tapetum development |
GO:0052543 | Biological Process | callose deposition in cell wall |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 493 aa
Download sequence Send
to blast |
MFDENGYLDP PYDPNPLPAT LVPSPSLAPT YDNSNNTTTN NNSGLEDNIR ISTFSLEDLS 60 NPNNLPSDEA AMVMGLDHLQ HQLGFDLEQE LHSHMIQDAP PMGGTNIWDS TMQDIQDSTI 120 HHQQNYEGQQ QHTAVQQNLQ SYDDTPYPDP SSHMVAPDLL NLLKLPTIAP MFPPTTSISF 180 SNPSLKPRNI PLDVYSELPG AAVPDNGPML YDSSLHLGYP APQPHLLKDL FHSLPQNYGL 240 FCGVDEGEAM VGVGGGIGGG HVFQEMDGRQ FDSTVLDYRR EMGGLGKGEV KPNFATERQR 300 REQLNEKYKA LRSLVPNPTK SDRASIVGDA IEYIKELLRT IEELKLLVGK KRHGRERIKM 360 MTMEDEGTAD MESSSMRPLR VDNDHPFNGA LRSSWLQRRS KESTVDVRII DDEVYIKLIQ 420 KKKANCLLYI AKVFDELQLE LIHASGGNIG DHYSFLFNTK ICEGSSAYAG AIAKKVLEVV 480 DRQQPALTFP ASF
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in the regulation of tapetum programmed cell death (PCD) and degradation during male reproductive development (PubMed:23519457, PubMed:23385589). Interacts with TDR and promote tapetal PCD by regulating the expression of RTS, and the two lipid-transfer proteins C4 and C6, which function in microspore development (PubMed:23519457). Acts downstream from and interacts with TDR in the regulation of tapetal PCD. Regulates directly the aspartic protease AP25 and AP37 during tapetal PCD (PubMed:23385589). May not target the cysteine protease CP1 (PubMed:23519457, PubMed:23385589). {ECO:0000269|PubMed:23385589, ECO:0000269|PubMed:23519457}. |