PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010917672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | TALE | ||||||||
Protein Properties | Length: 687aa MW: 76190.5 Da PI: 6.5925 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.6 | 2.5e-09 | 449 | 486 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +qV++WF N R + XP_010917672.1 449 FEHflHPYPKDSEKLMLARQTGLTRSQVSNWFINARVR 486 664459******************************88 PP | |||||||
2 | BELL | 122.2 | 2.2e-39 | 312 | 383 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+lq+k +kLl +l+eVd rYkqy++q+q+v+ssF+++ag g+akpYt+lAl++iS+hFrcL+dai +qi XP_010917672.1 312 ERQDLQNKVTKLLAMLDEVDSRYKQYYHQMQIVVSSFDIIAGFGAAKPYTALALQTISQHFRCLRDAIGGQI 383 799*****************************************************************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 1.0E-55 | 233 | 381 | IPR006563 | POX domain |
Pfam | PF07526 | 2.5E-49 | 239 | 379 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.406 | 427 | 490 | IPR001356 | Homeobox domain |
CDD | cd00086 | 2.67E-12 | 430 | 491 | No hit | No description |
SMART | SM00389 | 1.0E-9 | 430 | 494 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 1.54E-17 | 431 | 497 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.3E-28 | 433 | 496 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 1.9E-17 | 447 | 486 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 687 aa Download sequence Send to blast |
MLVVSVVLSW LNRWNNYEQF AADYYSDHCI KISNCLKSRE REMATFYTSS TNQRDAMPNL 60 CLRDPDALTG DAQSQQNSVE LPVPTAMISQ GSSVEGAHMV SSHLGKNAYN AWRDGRIEMS 120 FMQTIGGPIS GSGNLVRNSV SNECQMGLQT QLGTLNGQNL SLQQSNVSTM QNQGLSLSLS 180 TEILVPSFQY RPTSSDISLF GPHQSNLGNG GSCRDDDSGN KNMHANLSPY GVSSHTSSVP 240 NSKYLKAAQE LLVEVVNVRK ALKHKADNGQ SVHSSAGTTG CKDTDGASKS EGMPSNPQES 300 TANSSSELSP SERQDLQNKV TKLLAMLDEV DSRYKQYYHQ MQIVVSSFDI IAGFGAAKPY 360 TALALQTISQ HFRCLRDAIG GQIRATRKSL GEQDSSISQG GGIARLRYID QQLRQQRAMQ 420 QFGMMQQHSW RPQRGLPESS VSILRAWLFE HFLHPYPKDS EKLMLARQTG LTRSQVSNWF 480 INARVRLWKP MIEDMYKEEF GGTEIDSNSS SENPPKCKDE IRSSEDREDL QNFSAERSQT 540 NQLNDSKSKA IHTMDTGRAS ASFQHETNSN NAYMNLKLNE QRPTSDDGSL LQDTLTHSDG 600 SGRYMAYQMA EVGRYGNTGF SLTLGLQHCD GSVPISNNQH RFLTVRGEDI YGAAAPIGAD 660 TADYEFMNME DRQHRFGSSN LQHDFVA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4xrs_A | 7e-17 | 436 | 493 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 7e-17 | 436 | 493 | 1 | 58 | Homeobox protein Meis1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010917672.1 | 0.0 | BEL1-like homeodomain protein 7 isoform X2 | ||||
Swissprot | Q9SIW1 | 1e-134 | BLH7_ARATH; BEL1-like homeodomain protein 7 | ||||
TrEMBL | A0A2H3ZDJ6 | 0.0 | A0A2H3ZDJ6_PHODC; BEL1-like homeodomain protein 7 isoform X3 | ||||
STRING | XP_008812196.1 | 0.0 | (Phoenix dactylifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16400.1 | 1e-128 | BEL1-like homeodomain 7 |
Publications ? help Back to Top | |||
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