 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_010917010.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 289aa MW: 32944 Da PI: 6.1779 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010917010.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58 | 1.6e-18 | 88 | 141 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++++eq+++Le+ Fe +++ e++ +LA+ lgL+ rqV +WFqNrRa++k
XP_010917010.1 88 KKRRLNSEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 141
45689************************************************9 PP
|
| 2 | HD-ZIP_I/II | 130.9 | 5.1e-42 | 87 | 177 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
ekkrrl++eqv++LE++Fe +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr+++a+k+en++L++++++L++e+
XP_010917010.1 87 EKKRRLNSEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFEAIKSENDALQAQNKKLQAEI 177
69**************************************************************************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MACNGMASSS FFPPNFMLQM QTHHEEKHPP PTSINSILPT TPCTNLQDFR GVAPMLRKRS 60
MSYSGIEACE EMNAEDDLSD DCSQAGEKKR RLNSEQVRTL EKNFELGNKL EPERKMQLAR 120
ALGLQPRQVA IWFQNRRARW KTKQLEKDYD VLKRQFEAIK SENDALQAQN KKLQAEILAL 180
KGRETSELIN LNKETEGSCS NRSENSSENN LDISRTSAIE SPLNPHQSIP LFPSIRPADI 240
DQLLQTSSRP ELQYPKIEQG VPDGSLSNLL CSMEDQSSFW PWSDHHSFH
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 135 | 143 | RRARWKTKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
