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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010916876.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | CAMTA | ||||||||
Protein Properties | Length: 1048aa MW: 118012 Da PI: 5.8957 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 181.3 | 1.1e-56 | 20 | 136 | 2 | 118 |
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ ++rwl++ ei++iL n++k++++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+een++fqr XP_010916876.1 20 LEAQHRWLRPAEICEILRNYRKFHIAPESPNKPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQR 114 5679******************************************************************************************* PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee++ +ivlvhylevk XP_010916876.1 115 RSYWMLEEDYMHIVLVHYLEVK 136 *******************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 84.419 | 15 | 141 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 1.2E-79 | 18 | 136 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 5.0E-50 | 21 | 135 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:2.60.40.10 | 1.8E-5 | 461 | 550 | IPR013783 | Immunoglobulin-like fold |
Pfam | PF01833 | 9.7E-7 | 463 | 541 | IPR002909 | IPT domain |
SuperFamily | SSF81296 | 1.1E-16 | 463 | 549 | IPR014756 | Immunoglobulin E-set |
PROSITE profile | PS50297 | 19.014 | 648 | 759 | IPR020683 | Ankyrin repeat-containing domain |
Gene3D | G3DSA:1.25.40.20 | 2.5E-19 | 654 | 761 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 8.66E-15 | 654 | 757 | No hit | No description |
SuperFamily | SSF48403 | 1.41E-17 | 654 | 759 | IPR020683 | Ankyrin repeat-containing domain |
Pfam | PF12796 | 9.2E-8 | 670 | 760 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50088 | 9.137 | 698 | 730 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 0.019 | 698 | 727 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 770 | 737 | 766 | IPR002110 | Ankyrin repeat |
SuperFamily | SSF52540 | 1.46E-8 | 871 | 926 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 3.8 | 873 | 895 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.297 | 875 | 903 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.002 | 875 | 894 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 9.7E-4 | 896 | 918 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 9.505 | 897 | 921 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 7.4E-5 | 899 | 918 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1048 aa Download sequence Send to blast |
MADARRYGLT PQLDIEQILL EAQHRWLRPA EICEILRNYR KFHIAPESPN KPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH CYYAHGEENE NFQRRSYWML 120 EEDYMHIVLV HYLEVKGNKP SFSRTRDVDE IAQVANMESP VCSNSFTNHS QLPSQTTSAE 180 SPNSPHTSEY EDAESADNYQ ASSRYNSFLE MQQYGDGPVM DAHLLNPHVP VDSINNQCDI 240 QGAKATEPKS DFYSVVQENI TRVFDETGLG FTFSGSRTQF DLTSWDEVLE HYTTGFQTPS 300 FYPAVASTPS STVEDNLRLE TSTLGELHTD DLGFKQVDVA SAQDKSLWQL SSADIDPLVS 360 SNVGLQNGAS IEENVNAPSL ITQASLDFSN IEGEGLKKYD SFSRWMNNEL GEVDDSHMKS 420 SSGVYWNTVE SESVVEDSSM SNREHLDAYI VSPSLSQDQL FSIIDFTPNW AYSGMETKVL 480 ITGTFLKNKA DVEKCQWSCM FGEIEVPAEI LRDGTLRCHA PSHKSGRVHF YVTCSNRLAC 540 SEVREFEFRE NDVQYMEASD SYGSNTNEMR LHIRLEKLLT LGPVDHLKAV PDSTKENLHL 600 RNKISSLMME ADDEWSNLLK LTHEGFSPDS ARDRLLEKLM KEKLHSWLLH KVAEDGKGPN 660 VLDKEGQGVL HLAAALGYDW AIKPTITAGV SINFRDVRGW TALHWAANCG RERTVVALIA 720 SGAAPGALTD PTPEFPTGRT PADLASTNGH KGIAGFLAES SLTNHLSALT LKESKGIDVT 780 EISGITDVED VAEKSAIQVA EGDVQAGLSL KDSLSAVRNA SLAAARIYQV FRVHSFHRKK 840 VTEYGNDKCG ISDERALSLI SLKTAKPGQH DMPPHAAAIR IQNKFRGWKG RKEFLIIRQR 900 IVKIQAHVRG YQVRKHYKKI IWSVLIVEKA ILRWRRKGSG LRGFRSEGLL EGPAMQNQGT 960 KEDDYDFLQE GRKQTEARLQ KALARVRSMV QYPEARDQYR RLLNVVTELQ ESKAMQDRIT 1020 NESEEAADGE FMIELEELWQ DDTPMPTA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3'. Binds calmodulin in a calcium-dependent manner in vitro (PubMed:12218065). Regulates transcriptional activity in response to calcium signals (Probable). Involved in freezing tolerance in association with CAMTA1 and CAMTA2 (PubMed:23581962). Required for the cold-induced expression of DREB1B/CBF1, DREB1C/CBF2, ZAT12 and GOLS3 (PubMed:19270186). Involved in response to cold. Contributes together with CAMTA5 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). Involved together with CAMTA2 and CAMTA4 in the positive regulation of a general stress response (GSR) (PubMed:25039701). Involved in the regulation of GSR amplitude downstream of MEKK1 (PubMed:25157030). Involved in the regulation of a set of genes involved in defense responses against pathogens (PubMed:18298954). Involved in the regulation of both basal resistance and systemic acquired resistance (SAR) (PubMed:21900483). Acts as negative regulator of plant immunity (PubMed:19122675, PubMed:21900483, PubMed:22345509, PubMed:28407487). Binds to the promoter of the defense-related gene EDS1 and represses its expression (PubMed:19122675). Binds to the promoter of the defense-related gene NDR1 and represses its expression (PubMed:22345509). Involved in defense against insects (PubMed:23072934, PubMed:22371088). Required for tolerance to the generalist herbivore Trichoplusia ni, and contributes to the positive regulation of genes associated with glucosinolate metabolism (PubMed:23072934). Required for tolerance to Bradysia impatiens larvae. Mediates herbivore-induced wound response (PubMed:22371088). Required for wound-induced jasmonate accumulation (PubMed:23072934, PubMed:22371088). Involved in the regulation of ethylene-induced senescence by binding to the promoter of the senescence-inducer gene EIN3 and repressing its expression (PubMed:22345509). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:18298954, ECO:0000269|PubMed:19122675, ECO:0000269|PubMed:19270186, ECO:0000269|PubMed:21900483, ECO:0000269|PubMed:22345509, ECO:0000269|PubMed:22371088, ECO:0000269|PubMed:23072934, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25157030, ECO:0000269|PubMed:28351986, ECO:0000269|PubMed:28407487, ECO:0000305|PubMed:11925432}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, salt, wounding, ethylene and methyl jasmonate (PubMed:11162426, PubMed:12218065). Induced by infection with the fungal pathogen Golovinomyces cichoracearum (powdery mildew) and the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000 (PubMed:22345509). {ECO:0000269|PubMed:11162426, ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:22345509}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010916876.1 | 0.0 | calmodulin-binding transcription activator 3 isoform X1 | ||||
Refseq | XP_019704850.1 | 0.0 | calmodulin-binding transcription activator 3 isoform X1 | ||||
Swissprot | Q8GSA7 | 0.0 | CMTA3_ARATH; Calmodulin-binding transcription activator 3 | ||||
TrEMBL | A0A2H3Y9U6 | 0.0 | A0A2H3Y9U6_PHODC; calmodulin-binding transcription activator 3-like isoform X1 | ||||
STRING | XP_008795547.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP608 | 38 | 140 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22300.2 | 0.0 | signal responsive 1 |