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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010916785.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
LBD |
| Protein Properties |
Length: 235aa MW: 25964.9 Da PI: 8.4031 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010916785.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 98.4 | 7.1e-31 | 33 | 122 | 1 | 89 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleq 89
aCa+Ck++r+kC+++C lapyfpa+++++f vhk++G+sn++k+lka ++ re+ +++l++eAe+r dP +G+++ + +l+ + +
XP_010916785.1 33 ACASCKHQRKKCSESCELAPYFPADRTREFGQVHKVYGVSNLTKMLKANDTIPeRERCAETLMWEAEWRNIDPANGCYNEVIRLRDENAM 122
7***********************************************977655***************************999988765 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MQRNVPYPPA GPAQAPAAGA GAGVGAGQGG HQACASCKHQ RKKCSESCEL APYFPADRTR 60
EFGQVHKVYG VSNLTKMLKA NDTIPERERC AETLMWEAEW RNIDPANGCY NEVIRLRDEN 120
AMLRRVIGEC IDCSRQPLPQ PYHSPVQHPR RYPANGNDHN NNNNYLIRQA INNNNGNIGG 180
AMHHAEVVPP QHMVNYPPNN GNVINGYHNP HHSHPAIYMH GPGGQGNNGH GTFYR
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5ly0_A | 3e-17 | 29 | 125 | 7 | 102 | LOB family transfactor Ramosa2.1 |
| 5ly0_B | 3e-17 | 29 | 125 | 7 | 102 | LOB family transfactor Ramosa2.1 |
