PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010916623.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family BES1
Protein Properties Length: 340aa    MW: 36056.8 Da    PI: 8.5705
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010916623.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822206.85.9e-6431492149
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeae.aagssasaspesslq 95 
                     +++r ptw+ErEnnkrRERrRRaiaaki+aGLR++Gny+lpk++DnneVlkALc+eAGw+ve+DGttyr+g+kp e+++  +g s s sp++s+q
  XP_010916623.1   3 SGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRQGCKPVERMDvGVGGSVSPSPCTSYQ 97 
                     689************************************************************************777625799*********** PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149
                             +sp +sy++sp+sssfpspss+  +++++a      +sl+p+l++ls++sss
  XP_010916623.1  98 --------PSPHASYNPSPASSSFPSPSSSYITNANNAnkgtdgNSLIPWLKNLSSASSS 149
                     ........9*******************9888877766899999**********997766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.8E-663144IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MPSGTRLPTW RERENNKRRE RRRRAIAAKI FAGLRMYGNY RLPKHCDNNE VLKALCNEAG  60
WTVEEDGTTY RQGCKPVERM DVGVGGSVSP SPCTSYQPSP HASYNPSPAS SSFPSPSSSY  120
ITNANNANKG TDGNSLIPWL KNLSSASSSS SSSKLPNPHY LFIHGGSISA PVTPPLSSPT  180
ARSPRIKADW DDSAAQPPWA GAQYSFLPSS TPPSPGRQVI PDPAWLAGLR LPSGGPSSPT  240
YSLVSSNPFG FFKEASAGAG SSRMWTPGQS GTCSPVPGGG HADVQMSDGI SDEFAFGSSS  300
NGNLPANGLV KPWEGERIHE ECASDELELT LGSSRTRSGA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010916623.10.0protein BZR1 homolog 3
SwissprotQ5Z9E51e-138BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLA0A2H3YAV70.0A0A2H3YAV7_PHODC; protein BZR1 homolog 3
STRINGXP_008796066.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-107BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]