PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010916401.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | bHLH | ||||||||
Protein Properties | Length: 269aa MW: 29860.7 Da PI: 6.257 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.8 | 1.9e-08 | 165 | 212 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+riN+++ L++l+P + k + a +L + ++Y++sLq XP_010916401.1 165 SHSLAERVRRERINEKMRCLQDLVPGC----YKAMGMAGMLDEIINYVQSLQ 212 8*************************8....355999999999999999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.62E-16 | 159 | 228 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.33E-10 | 159 | 216 | No hit | No description |
PROSITE profile | PS50888 | 15.65 | 161 | 211 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.4E-16 | 161 | 223 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 9.5E-6 | 165 | 212 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.5E-9 | 167 | 217 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence Send to blast |
MAEFLDNFNC LKPSLPFVEM DPSFELMMAH FAELNGTDME NSSEGLMGFS SENCLSHLPE 60 FSMPFADNLP SFLSPECAKP ITISQPVASD GEQSHGDRKR KAKAAPETSS ANSSEPRTQS 120 CIRDDKSKKK TGSGSVKRRR SNSKEVEKPK EVVHVRARRG QATDSHSLAE RVRRERINEK 180 MRCLQDLVPG CYKAMGMAGM LDEIINYVQS LQNQVEFLSM KLSAASSFYD YSLELEAMAT 240 PQVGEAQEMG RVGREGYGGC TSFHSTMPF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010916401.1 | 0.0 | transcription factor bHLH75 | ||||
TrEMBL | A0A2H3YEZ1 | 1e-159 | A0A2H3YEZ1_PHODC; transcription factor bHLH75-like isoform X1 | ||||
STRING | XP_008797805.1 | 1e-160 | (Phoenix dactylifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18400.1 | 2e-54 | BR enhanced expression 1 |