PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010916232.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 713aa    MW: 77200.8 Da    PI: 6.6977
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010916232.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.81.2e-28171224155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++Wt eLH++Fv+av+qL G ++A+Pk+il+lm+v+gLt+e+v+SHLQk+Rl
  XP_010916232.1 171 KPRVVWTVELHQQFVNAVNQL-GVDRAVPKRILDLMNVPGLTRENVASHLQKFRL 224
                     79*******************.********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011011.0671102IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23002.1E-52965No hitNo description
SuperFamilySSF521725.81E-1336128IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23005.3E-1166122No hitNo description
Gene3DG3DSA:1.10.10.603.3E-30168229IPR009057Homeodomain-like
PROSITE profilePS5129411.658168227IPR017930Myb domain
SuperFamilySSF466893.85E-20169228IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-24171224IPR006447Myb domain, plants
PfamPF002491.5E-7173222IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 713 aa     Download sequence    Send to blast
MATVQQMPLS SMDMGSVYGG SSSKVNKPMP KDFPMGLRVL VVDDDTTCLK VLERMLLECH  60
YNVMSADMRT SIVMQGIKHG ACDYLIKPVR MEELKNIWQH VVRKKWKENR EAEHSDSFED  120
TDHNRRVIDD AEKTSSGTDA TDNICKSQKK RRDVKEDDEG ELDNTDSSSK KPRVVWTVEL  180
HQQFVNAVNQ LGVDRAVPKR ILDLMNVPGL TRENVASHLQ KFRLYLKRLS SAQHHTGLPI  240
SLPDAGSNAE VPSLGSLDFQ TLTVSGQIPP QTLAAWQDEL FGRPAGSLGM PEMVQPVLQQ  300
ASIQGAKSVP VEHGIVFGQP LIKCQANMPK QFPQSNVAVR GLSSGFPTWS SNNLGVVSGS  360
NLGGLSSTQN SNLLVPMLQQ QQPHPVLSES HHAINVQPSC LVLPSQVSKR FQAREKPVLV  420
NQNSVLVPSQ SSTSLQAENN PTMNQNSIFA PPKSSNSMQA GNNLSLVSRN SSLTSSQGGN  480
NPGLINQEPM GPSQSSTSFQ DGNDPGLINQ NCMVVPPRLL TSFQEGSSPA PISYCSSYKN  540
SAIVDNSLLS SQSNNAQLGQ AQVLDEGFKD ITVLNRYLIP KSIYSSVPSC TDASAGWRAQ  600
TPDGNIGPIN QSPYLVPNLK NIQGAGAVSQ TLPDQGQGRN LGFPNLSNIQ GGGTVSQTLP  660
DKGQGRSLGF IGQGTRIPCR FAVDDIESPT NGTSPDDDKD ILNKDFFGLN GDI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-24167230164ARR10-B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029119216.10.0two-component response regulator ORR21 isoform X2
TrEMBLA0A2H3WYF00.0A0A2H3WYF0_PHODC; LOW QUALITY PROTEIN: two-component response regulator ORR21
STRINGXP_008775607.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.18e-79response regulator 2