PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010916075.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 199aa    MW: 21197.7 Da    PI: 12.3703
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010916075.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.80.000111291631554
                     HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++++++  L +l+P +     +Kls  + Le+Av+Y+  L
  XP_010916075.1 129 KVRDRLRVLSRLVPGC-----RKLSAPSLLEEAVDYVAAL 163
                     78999999*******9.....8**************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.144114163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-8128181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.1E-8129177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MISSPSSSSA SASRKKQRPG PHPQPQNKWR TGAQERIYGR RLLEALRSAR AGRASAAGGG  60
ARAVKEAADS ALALTARGQS RWSRAILFGR CRRRKLLLKA GGKILRRRTR PGRKAAAPPP  120
PPAALKGKKV RDRLRVLSRL VPGCRKLSAP SLLEEAVDYV AALEMQVKAM RALADALSAA  180
ALSRPPPPAA AAATPEPEN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010916075.21e-132transcription factor bHLH149
TrEMBLA0A2H3X7A33e-72A0A2H3X7A3_PHODC; transcription factor bHLH149-like
STRINGXP_008779352.15e-73(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP165858