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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010915510.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family |
Trihelix |
Protein Properties |
Length: 315aa MW: 35159.6 Da PI: 10.4569 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010915510.1 | genome | OG | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 53 | 9e-17 | 21 | 110 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
+W++ + aLiea ++ +l+rg+l++++W+ev++++ ++r r+ +qCk++++ l+k+yk +k+ +++ ++s +p++ +l+a
XP_010915510.1 21 CWSEGATAALIEAWGDRYVELNRGNLRQKHWQEVADAVnsrrgAARRPPRTDVQCKNRIDTLKKKYKTEKAKIADGA--VESPWPFYPRLDA 110
7*************************************98766666667889***********************84..5556******985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MEGRETKPPP PNPAMPYRED CWSEGATAAL IEAWGDRYVE LNRGNLRQKH WQEVADAVNS 60 RRGAARRPPR TDVQCKNRID TLKKKYKTEK AKIADGAVES PWPFYPRLDA LIGDSFPAKK 120 PXPSHPPSPP LALPLPFHRK GSPLPAAAAA AAAAAAAARP LDSKEKRPAA TALPVDDAFF 180 RRNYSAAAAA AAERESESSS RSSVERSRSS RERIARGLKR RREGYGEGFR QLARAILRLG 240 EIYEKIEEEK QQQMIDLEKQ RMEFAKGLEF QRMQIFVDSQ VQLEKIKRSK RVDAGEHGSS 300 SGAIHFLFGS PVFNV
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G58630.1 | 7e-35 | sequence-specific DNA binding transcription factors |