PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010915334.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TALE
Protein Properties Length: 627aa    MW: 69408.7 Da    PI: 6.7873
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010915334.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox25.52.3e-085495871854
                     HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     +F++  ++yp+ +e+  LA k gLt +qV++WF N R +
  XP_010915334.1 549 MFQNflHPYPKDNEKHLLAIKSGLTRSQVSNWFINARVR 587
                     5887779******************************88 PP
2BELL72.76.2e-24425489771
            BELL   7 kkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 
                      kk+ L+++l+ Vd+rY+q+ +q++ vis+F  ++g g+a++++ +Al++iS  +++L+ +i+++
  XP_010915334.1 425 TKKTELVTMLQLVDQRYNQCIDQIHDVISAFCNATGSGTAHMHAWFALRTISSLYKNLRKRITSR 489
                     79************************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.2E-19335488IPR006563POX domain
PfamPF075268.2E-30340487IPR006563POX domain
PROSITE profilePS5007111.353528591IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.607.8E-26530604IPR009057Homeodomain-like
SuperFamilySSF466893.29E-15531599IPR009057Homeodomain-like
CDDcd000864.08E-11531592No hitNo description
SMARTSM003892.5E-5531595IPR001356Homeobox domain
PfamPF059202.6E-14548587IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008285Biological Processnegative regulation of cell proliferation
GO:0009640Biological Processphotomorphogenesis
GO:0010073Biological Processmeristem maintenance
GO:0010227Biological Processfloral organ abscission
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0010371Biological Processregulation of gibberellin biosynthetic process
GO:0090470Biological Processshoot organ boundary specification
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    Send to blast
MEHDLFNASL SLPTHNELAI ESASLHMLSD PLTQSSLPGN NNHRQTMAGY PLLSTFQEEA  60
LNSLYAANNG DMFNGNLSYS RNMPHVGNTS YDGSNGNTDL REHFMGTCLS ATSLANLLSA  120
STCLHENLIN INTVSASSLP PEETRTSVSC DSCNTIDSSV TTSVNCAIVP QGDGGLLTSK  180
KGACLNGQFN YSWNYEEVLG REMPSGKTFT SIHPSYHVLG SSETGWSYDK ASLKFSHPFN  240
NYMPSNELSL SLGASQPSII SMPHAPDQGS EASCSGVTLV TSNDSGYPVP TELPACSHAF  300
RNSPCDVGWG MGVRSGQPLP NNEKFSLYHM TSSLFRLSHV LSGSRYLHVA QQILAEVISY  360
AVPDWHEMNS DSVAGIEGED KMSFSSSWSN IQELAISGSD EYPLSSGEIK SQGLVDGQRC  420
LEAFTKKTEL VTMLQLVDQR YNQCIDQIHD VISAFCNATG SGTAHMHAWF ALRTISSLYK  480
NLRKRITSRL LLMTQRPSTE CMREKEKSLE SSLIQKQWAL QQLRRRDQHS WRPQRGLPEK  540
SVSVLRAWMF QNFLHPYPKD NEKHLLAIKS GLTRSQVSNW FINARVRLWK PMIEEMHSEL  600
TKKNQTDGSG GESRSHGNIR GQRLQTT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A9e-15537595563Homeobox protein Meis2
4xrm_B9e-15537595563Homeobox protein Meis2
4xrs_A7e-15537594158Homeobox protein Meis1
4xrs_B7e-15537594158Homeobox protein Meis1
5bng_A8e-15537595159Homeobox protein Meis2
5bng_B8e-15537595159Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010915332.10.0BEL1-like homeodomain protein 3 isoform X1
RefseqXP_010915334.10.0BEL1-like homeodomain protein 3 isoform X1
RefseqXP_010915335.10.0BEL1-like homeodomain protein 3 isoform X1
RefseqXP_029119027.10.0BEL1-like homeodomain protein 3 isoform X1
TrEMBLA0A2H3ZR770.0A0A2H3ZR77_PHODC; uncharacterized protein LOC103709546 isoform X1
STRINGGSMUA_AchrUn_randomP03720_0010.0(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32980.16e-79homeobox gene 1