PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010914127.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ARR-B
Protein Properties Length: 629aa    MW: 69813.5 Da    PI: 5.3329
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010914127.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like79.63.7e-25257310155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr +W+pe+H+ F++av++L G+++A+Pk+i +lm+v+gLt+e ++SHLQkYRl
  XP_010914127.1 257 KPRFVWSPEMHALFLKAVHHL-GIDRAVPKKIQDLMNVPGLTRETIASHLQKYRL 310
                     79*******************.********************************8 PP
2Response_reg79.51.1e-26611681108
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vlivdD+ + +++++ +l + gy  v+++ d+  al+ll+e++  +Dl++ D++mp+mdG+ell+ i  e  ++p+i+++a ge +++ + + +G
  XP_010914127.1  61 VLIVDDDVISLRAVEFLLLRCGY-LVTATLDAVTALKLLRENRdnYDLVISDVRMPEMDGFELLEAIGLEM-DVPVIMLSADGEVNTVMKGIAYG 153
                     8**********************.***************999889**********************6654.8********************** PP

                     ESEEEESS--HHHHH CS
    Response_reg  94 akdflsKpfdpeelv 108
                     a d+l+Kp+  eel+
  XP_010914127.1 154 AVDYLVKPVRLEELR 168
                     ************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.15E-3558177IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.5E-3858204No hitNo description
SMARTSM004482.9E-3459171IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011044.46460175IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.1E-2361168IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.20E-3162174No hitNo description
PROSITE profilePS512949.903254313IPR017930Myb domain
SuperFamilySSF466891.7E-18254314IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-26255314IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-22257310IPR006447Myb domain, plants
PfamPF002491.8E-5261309IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 629 aa     Download sequence    Send to blast
MENHGKRKSL PSSSRRPKKS RPSGSPSDRG FLRSQSDSWL RSMVADSSNG GQSQFPFGMR  60
VLIVDDDVIS LRAVEFLLLR CGYLVTATLD AVTALKLLRE NRDNYDLVIS DVRMPEMDGF  120
ELLEAIGLEM DVPVIMLSAD GEVNTVMKGI AYGAVDYLVK PVRLEELRLI WKHVVKKSLH  180
GTKEANNPGD RNNHEEELED DHEEELDDNH EIELEDNHDR ELEADHEKEL EDDHTTKVMR  240
KGKERESSSD GSSTQKKPRF VWSPEMHALF LKAVHHLGID RAVPKKIQDL MNVPGLTRET  300
IASHLQKYRL AIKKNRMGMN LQYYGGVGPN GCGGSYPSLF LLPFNQHLLS NVNTPGGLNP  360
VCHSQNSHYN LSQITPAWLP HLMNNQDNVH QQFMANPQAG QLKLQQFGYA LNPYVVGTSN  420
TESGFQGSAY HYLTARPNQV DGHMQNSSHN PCSSTGNPGP NSGPQPGHLS NPFMMGTSNA  480
LSGFNSLSCQ GLTSTDQVDG SVQNSSYHPC ANSGHPGPSS GFQPGLFFDD TNFQHDVLED  540
STLAELNARS PMQYEQNKFV DHTGADVGMQ GSGDSMDLQS CPDGEIFKEI SNSDLTKHPS  600
EHSPSETAFD IDKCDSMDDL DTFFKQFQQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A5e-22253314162ARR10-B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026664788.10.0two-component response regulator ARR14-like
RefseqXP_026664789.10.0two-component response regulator ARR14-like
TrEMBLA0A3Q0ID700.0A0A3Q0ID70_PHODC; two-component response regulator ARR14-like
STRINGXP_008805439.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5075122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31920.15e-71response regulator 10