PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010914024.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 739aa    MW: 80873.6 Da    PI: 6.4406
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010914024.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1062e-33327383259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+
  XP_010914024.1 327 EDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSQ-EGHITEIIYKGAHNHP 383
                     8****************************************.***************8 PP
2WRKY103.41.3e-32533591159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC v+k+ver+++d k v++tYeg+Hnhe
  XP_010914024.1 533 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCIVRKHVERASHDLKSVITTYEGKHNHE 591
                     59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.3E-29319384IPR003657WRKY domain
SuperFamilySSF1182909.81E-26324384IPR003657WRKY domain
SMARTSM007742.7E-37326384IPR003657WRKY domain
PROSITE profilePS5081121.609327385IPR003657WRKY domain
PfamPF031068.4E-26327383IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-36518593IPR003657WRKY domain
SuperFamilySSF1182901.83E-28525593IPR003657WRKY domain
PROSITE profilePS5081137.86528593IPR003657WRKY domain
SMARTSM007745.1E-37533592IPR003657WRKY domain
PfamPF031061.7E-24534591IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 739 aa     Download sequence    Send to blast
MAGLDDNAVV IGEMMPWTPS HRSFLSDFKS DEFGTQSSDS MQNGNQAKVS TSDKQDVIMN  60
SKDEESETRI QFPSDSSSEL SSLDVQKSSM RGGLAERIAA RAGFSSLRLN TAEIRQAIFS  120
SSTTDVCPLY ITIPPGLSPA ALLNSPVFLS NSMAESSPTR GKFPFTQCTN NCSMSDWTTP  180
DKRDSHTVED MDPQLFAFKP QLGSSSRYTS CAENKADPKT NHQHSSNIKE LAQSDCPAQT  240
KGVEPSLQCQ PQQDFKLQDG LHDSLLRKDG LYDSTNQRDT TEKTLLHQST TYPVMGREHP  300
PAPDDPQDGG VDTKGEVSSL AVGTPAEDGY NWRKYGQKQV KGSEFPRSYY KCTHPNCPVK  360
KKVERSQEGH ITEIIYKGAH NHPRLSHSFR SMQLEGSEQR GLQSGCHGEQ HSKVNTRNGT  420
SAHDGRNDGL EATLSPSRAA EFRDTSTSML VTEGCASCEI KDAMDVSSAL SNNQEENDQA  480
NHGSMSQGCD GEGDEIEPKR RKLDAGALEM SASSKVVREP RVVVQTTSEV DILDDGYRWR  540
KYGQKVVKGN PNPRSYYKCT NPGCIVRKHV ERASHDLKSV ITTYEGKHNH EVPAARNNCQ  600
ASCGSFNAPQ TSAPQPQSLD RRPELAQMQE RLARLEWPPP LGKACTSGSG QLAPTSSFSF  660
GINQGLAMNL AMAGFGPLAS MQMPMPPLGY SFLHDHHRAS EGGFMASNGE PEEKPISEPR  720
LPASINHQLT GRIPLGPQL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-36310594778Probable WRKY transcription factor 4
2lex_A1e-36310594778Probable WRKY transcription factor 4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029118890.10.0probable WRKY transcription factor 2
TrEMBLA0A3Q0I8G50.0A0A3Q0I8G5_PHODC; probable WRKY transcription factor 2
STRINGXP_008794757.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP207538100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-132WRKY DNA-binding protein 2