PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010913870.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 325aa    MW: 36389.3 Da    PI: 4.7464
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010913870.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.42.4e-11155204453
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                     +k+ rr ++NR +A +sR+RKk +i+eLe k+k Le+e ++L   l+  +
  XP_010913870.1 155 SKKRRRQMRNRDSAMKSRERKKIYIKELEMKSKYLESECRRLNYALQCCS 204
                     6999**********************************999987766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-4149216IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.5E-12149214No hitNo description
PROSITE profilePS502179.864154217IPR004827Basic-leucine zipper domain
PfamPF001701.1E-8156201IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.19E-10156214No hitNo description
CDDcd147049.64E-16157207No hitNo description
PROSITE patternPS000360159174IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MGDVVEAPTP DFLGDLDFDR LLEGFFNDSA LDLSPELWNS EPSPDESKFA GSVSTGRSTE  60
RLIPEPPPEQ SDSPDSMHSF VNEIEKFLME DGGGGEDVID DEFLAGFFSD VSADSGKSEV  120
ASPEAEPVPA AVESEAKEKR EASAAVDVED DDPISKKRRR QMRNRDSAMK SRERKKIYIK  180
ELEMKSKYLE SECRRLNYAL QCCSAENLTL HQRLQERTLG VPVARQESAV LFVESLLLGS  240
LFWLVSIMFL FLVPGLPQPR KVASSLERGL AHREIVVTGR VTSERVEKCL GLDLSIMRRR  300
CRGSRSRMKF CLFLFCMVGL GTVQH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156175KRRRQMRNRDSAMKSRERKK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22199238}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010913870.10.0bZIP transcription factor 50
SwissprotQ69XV02e-57BZP50_ORYSJ; bZIP transcription factor 50
TrEMBLA0A2H3WY671e-160A0A2H3WY67_PHODC; bZIP transcription factor 50
STRINGXP_008775480.11e-161(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69343750
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.12e-10basic region/leucine zipper motif 60
Publications ? help Back to Top
  1. Wakasa Y, et al.
    Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm.
    Plant J., 2011. 65(5): p. 675-89
    [PMID:21223397]
  2. Lu SJ, et al.
    Conservation of IRE1-regulated bZIP74 mRNA unconventional splicing in rice (Oryza sativa L.) involved in ER stress responses.
    Mol Plant, 2012. 5(2): p. 504-14
    [PMID:22199238]