PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010913399.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family GeBP
Protein Properties Length: 432aa    MW: 46375.9 Da    PI: 5.068
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010913399.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573112.82.2e-35199295297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                     lfqrlws +Dei++L Gl+++++k+g+ ps+ ++d++++ +++s++++vs++ql +KirrLKkKf+++v + k+g +p+fsk++++ +felskki
  XP_010913399.1 199 LFQRLWSPDDEIAVLSGLVEYRSKKGTLPSShEMDQLHNLIRGSLQVEVSNNQLNDKIRRLKKKFETNVGRGKNGADPTFSKPQERTAFELSKKI 293
                     79*************************777669************************************************************** PP

          DUF573  96 Wg 97 
                     Wg
  XP_010913399.1 294 WG 295
                     *8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PRINTSPR012171.3E-92941No hitNo description
PRINTSPR012171.3E-94965No hitNo description
PRINTSPR012171.3E-992113No hitNo description
PRINTSPR012171.3E-9139156No hitNo description
PRINTSPR012171.3E-9162187No hitNo description
PfamPF045042.2E-32200295IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MAPKRPAVEA TSSSSSDEAA SSSDEEHEEA PLSSPSPDKT IVQKKPTNPP APAPPAPKSH  60
PSQRPAPASS DEDEDDSEDE EETSASESDD DQTKKQPPPX PQPQPSHPYP NPPPQPTASG  120
SSDGSGSGSD SEEESSDEEP APVRRPSRGA DPSIKPISSK PMDEASQPKK PTAASPSPRK  180
KAKTSEPSEN DGGGPKRPLF QRLWSPDDEI AVLSGLVEYR SKKGTLPSSH EMDQLHNLIR  240
GSLQVEVSNN QLNDKIRRLK KKFETNVGRG KNGADPTFSK PQERTAFELS KKIWGAKKIL  300
SEDAGASSGE EDEGEESDSE MAGQQNVKEE NAASPAASLK LLDGVSPAPP LANGSAKLRY  360
PFLSGAVTKL ANECKCGTAM KRALENVEDS KARAMEEKVK KQKMGEMKLH VRRMDLMKET  420
VKHIVEALAK SD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177183PRKKAKT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010913399.10.0LOW QUALITY PROTEIN: STOREKEEPER protein-like
TrEMBLA0A2H3YY650.0A0A2H3YY65_PHODC; STOREKEEPER protein-like
STRINGXP_008805601.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26713587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.12e-28DNA-binding storekeeper protein-related transcriptional regulator