PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010913249.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 738aa    MW: 79386.5 Da    PI: 5.8883
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010913249.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.11.5e-32318375260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     +DgynWrKYGqK+vkgsefprsYY+Ct+++C+vkkkvers+ +++++ei+Y+g Hnh+k
  XP_010913249.1 318 EDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCQVKKKVERSH-EGHITEIIYKGAHNHSK 375
                     8****************************************.***************85 PP
2WRKY103.21.5e-32532590159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver+++d k v++tYeg+Hnh+
  XP_010913249.1 532 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHD 590
                     59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-28315376IPR003657WRKY domain
SuperFamilySSF1182903.01E-25316376IPR003657WRKY domain
SMARTSM007743.4E-36317375IPR003657WRKY domain
PfamPF031068.8E-25318373IPR003657WRKY domain
PROSITE profilePS5081122.538318376IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.8E-37517592IPR003657WRKY domain
SuperFamilySSF1182901.44E-28524592IPR003657WRKY domain
PROSITE profilePS5081138.124527592IPR003657WRKY domain
SMARTSM007747.5E-38532591IPR003657WRKY domain
PfamPF031068.2E-25533590IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 738 aa     Download sequence    Send to blast
MAASDDNITM IGDWAPPPNP SPRTFLSTFL NGEFGSKSFS DLLSENGIEG LPPGSEKQKT  60
VMGPKEEEGR EGVQYSSDLS LETSLFGAHK SISQGGLAER MAARAGFSVP KLNMAHISLA  120
NMGSSSSDVR SPYVTIPPGL SPTTLLESPV FLSNSMSQPS PTTGKFPFVQ SSNSNPITSS  180
VSAFPSKNED VHGAFTFKPH LDSSSSSFLS AEKKGASTAD QQQSLPSIEV SVQSGKPVQT  240
SSPETGTVNL QNQQQFNLQA GFSDSSDRKN ATDDVMFNQR MSDSFMGNDQ SPPPDDQQDG  300
EADQKGELCS VAFGAPAEDG YNWRKYGQKQ VKGSEFPRSY YKCTHPNCQV KKKVERSHEG  360
HITEIIYKGA HNHSKPPPNR RTGVPSSHPF NDPQIDGSEQ PGSQASFEGK PLWASTQNGT  420
GGQEWRGDGL EASSSATIAA EFCDPSTSIQ TQDGPRFESQ DAIDVSSTLS NDEEEDDQAT  480
HGSVSLGCDG EGDETESKRR KLDACAIEMS AASRAVREPR VVVQTTSEVD ILDDGYRWRK  540
YGQKVVKGNP NPRSYYKCTN PGCTVRKHVE RASHDLKSVI TTYEGKHNHD VPAARNSSHP  600
NSAPPGTAGN PASQSHNLHR RLEPTQDGLV RFDAPAPLGS FGLPGREQLG PAAATFSFGM  660
GQQSLANFAM AGLGPMASMK MPVLPPVHPY LGHRQVAESG FMIPKGEPKE EPMSESRLPM  720
SNGGSVYHQM MSRLPLGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-37318593878Probable WRKY transcription factor 4
2lex_A1e-37318593878Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010913249.10.0probable WRKY transcription factor 2
RefseqXP_010913250.10.0probable WRKY transcription factor 2
RefseqXP_010913251.10.0probable WRKY transcription factor 2
RefseqXP_010913252.10.0probable WRKY transcription factor 2
RefseqXP_029118522.10.0probable WRKY transcription factor 2
TrEMBLA0A2H3YZH50.0A0A2H3YZH5_PHODC; probable WRKY transcription factor 2 isoform X1
STRINGXP_008806182.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP207538100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-171WRKY DNA-binding protein 2