 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010913242.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
GRAS |
| Protein Properties |
Length: 409aa MW: 45899.9 Da PI: 7.2611 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010913242.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 402.2 | 5.2e-123 | 37 | 408 | 3 | 373 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97
+lL++cA+ ++ d + a+++++ ls+++sp+gd++ Rl++ ft+AL+ r+ + l + l+ps s +n ++ +++ +++v+P+l+f+hlt
XP_010913242.1 37 QLLISCAKLIHRADYSDARRIISFLSTISSPHGDSTDRLIHQFTRALSLRIDN----LTHLLSPSLFS-SNGDTLQSSYLSLNKVTPFLRFAHLT 126
89**************************************************9....88888899997.678888889999************** PP
GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
aNqaIlea++g + +Hi+Df+ +G+QWp+Llqa+a+R+ ++ ps+RiTg g+ + + l++tg+rL+ fA++lg++f+f++l+ ++++
XP_010913242.1 127 ANQAILEAIDGRQSIHILDFNTLHGVQWPPLLQAIAERSddpSNRPSIRITGTGA----DLDVLHRTGDRLEAFANSLGLRFQFHPLYLSTTNVD 217
**************************************9777789**********....***************************977655555 PP
GRAS 190 ...eleeLrvkpgEalaVnlvlqlhrlldesvsles...erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
l++++++pgE+laVn+vl lh+ll++ s+++ e ++L++vk ++P vv+v+e+ea+hns+ Fl+rf+eal++y+a+f+slea+lp++
XP_010913242.1 218 tgaGLRSFQLHPGETLAVNCVLFLHKLLKDGSSTDDppcELMAFLRAVKAMKPVVVTVAEREANHNSPVFLQRFMEALDHYTAVFESLEATLPPK 312
223567778889****************99999999888899***************************************************** PP
GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
s+er+ vE+ +lgrei+++v+ eg+ rrerh ++e W+ +++ GF++v+ls +a +qaklllr ++ s+gy+++ ++++l+lgW+++pL+svS+
XP_010913242.1 313 SQERREVEELWLGREIEDIVSREGEGRRERHARFEWWEGLMRDRGFSSVQLSPFAFSQAKLLLRLHYpSEGYQLQMSKNCLFLGWQHKPLFSVSS 407
*********************************************************************************************** PP
GRAS 373 W 373
W
XP_010913242.1 408 W 408
* PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 409 aa
Download sequence Send
to blast |
MLTSLNSHTG GGGSTHHQPS HQSSPHGLIS PSTHSSQLLI SCAKLIHRAD YSDARRIISF 60
LSTISSPHGD STDRLIHQFT RALSLRIDNL THLLSPSLFS SNGDTLQSSY LSLNKVTPFL 120
RFAHLTANQA ILEAIDGRQS IHILDFNTLH GVQWPPLLQA IAERSDDPSN RPSIRITGTG 180
ADLDVLHRTG DRLEAFANSL GLRFQFHPLY LSTTNVDTGA GLRSFQLHPG ETLAVNCVLF 240
LHKLLKDGSS TDDPPCELMA FLRAVKAMKP VVVTVAEREA NHNSPVFLQR FMEALDHYTA 300
VFESLEATLP PKSQERREVE ELWLGREIED IVSREGEGRR ERHARFEWWE GLMRDRGFSS 360
VQLSPFAFSQ AKLLLRLHYP SEGYQLQMSK NCLFLGWQHK PLFSVSSWN
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor required for axillary (lateral) shoot meristem formation during vegetative development. Seems to act upstream of REVOLUTA. {ECO:0000269|PubMed:12730136}. |
