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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010912856.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family |
Trihelix |
Protein Properties |
Length: 409aa MW: 46376.8 Da PI: 6.1476 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010912856.1 | genome | OG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 84.6 | 1.2e-26 | 95 | 176 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W ++e++ Li +rrem+ ++++k++k+lWe++s+kmr++gf rsp++C++kw+nl k++kk k+++k+ ++ +++y+++l+
XP_010912856.1 95 WVQEETRSLISLRREMDALFNTSKSNKHLWEQISAKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQAKGS--GA-AKISYYKELD 176
*******************************************************************984..34.4789**9998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 409 aa
Download sequence Send
to blast |
MSLLTLDQYL SQSVLPCFRS REDDGDEEEQ GRRKSMYLSD KPRSGDYYKE DGRGMMIQVA 60 GNGGLPPPQQ QPMILADSSG EDHEVKAPKK RAETWVQEET RSLISLRREM DALFNTSKSN 120 KHLWEQISAK MRDKGFDRSP TMCTDKWRNL LKEFKKAKHQ AKGSGAAKIS YYKELDEMLK 180 ERSKNAAYKS PPASKVDPYL QFSDKGPEDA SISYGSVEGN GRSTLNVDRH LDHERNPLAI 240 TAADEVATNG VPPWSWRDTP TNGGDNHASY GGRVISIKWG DYTRKIGIDG STEAIKDAIK 300 SAFGLRTRRA FWLEDEDEVV RSLDRDMPLG TYTLHLDDGI TIKICIYDET DRIPVRTEEK 360 TIYTQEDFRD FLNRNGWKGL RELSGFRSVD TMDDLHPGAA YQGIRLLGD
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specifically to the core DNA sequence 5'-GGTTAA-3'. May act as a molecular switch in response to light signals. {ECO:0000269|PubMed:10437822, ECO:0000269|PubMed:15044016, ECO:0000269|PubMed:7866025}. |