PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010912286.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 490aa    MW: 54186 Da    PI: 6.9192
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010912286.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-10175216445
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                      k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  XP_010912286.1 175 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDL 216
                     5889*************************9777777666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.1E-6172236IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.186174218IPR004827Basic-leucine zipper domain
PfamPF001708.0E-8175217IPR004827Basic-leucine zipper domain
CDDcd147084.09E-23176228No hitNo description
SuperFamilySSF579598.13E-7176218No hitNo description
Gene3DG3DSA:1.20.5.1702.2E-7177220No hitNo description
PROSITE patternPS000360179194IPR004827Basic-leucine zipper domain
PfamPF141441.8E-29256328IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
MANHRVGETG LSESGPSSQP LAYGVHGIPP AATNFFDQEG AAYFGELEAA LMHGVAGIRS  60
DEDRKPFFTT RPPTLEIFPS WPMRFQQTPK GNSQPVESTD SGSAQNTISQ LDSDSPVSIK  120
ASSEQCSEQN QQQQGMIACD VPATGAAAPN HQPRTQEKRR MAGATAEKDG KILDAKTLRR  180
LAQNREAARK SRLRKKAYVQ QLESSRIKLT QLEQDLQRAR SQGLFFGGAS AGENISSAAA  240
IFDMEYDRWL DENYKHMTNL RGGLQAHLPE GDLRVIVDEC LTHYDEMFRL KGVAARADVF  300
HLITGMWTTP AERCFLWMGG FKPSELLKEI LIPQLDPLTE QQLVGICSLQ QSSQQAEEAL  360
SQGLEKLHQS LRDTVSSGSL CEGTNVGNYM DQMGVALGKL ANLEGFVRQA DNLRQQTLHQ  420
LHRILTVRQA ARSFLAIGEY HGRLRALSSL WASRPRDACI RNLITDGSAY PTTTDLQIIH  480
QPVHSHFSAF
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response (By similarity). Acts as transcriptional activator in vitro (PubMed:22353606). {ECO:0000250|UniProtKB:Q7X993, ECO:0000269|PubMed:22353606}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010912286.10.0transcription factor TGAL5 isoform X1
SwissprotQ5N7C70.0LG2_ORYSJ; Transcription factor LG2
TrEMBLA0A3Q0I3P00.0A0A3Q0I3P0_PHODC; transcription factor TGAL5-like isoform X2
STRINGXP_008787868.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-156bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    A rice transient assay system identifies a novel domain in NRR required for interaction with NH1/OsNPR1 and inhibition of NH1-mediated transcriptional activation.
    Plant Methods, 2012. 8(1): p. 6
    [PMID:22353606]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]