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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010912286.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | bZIP | ||||||||
Protein Properties | Length: 490aa MW: 54186 Da PI: 6.9192 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.9 | 1.4e-10 | 175 | 216 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L XP_010912286.1 175 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDL 216 5889*************************9777777666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.1E-6 | 172 | 236 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.186 | 174 | 218 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.0E-8 | 175 | 217 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 4.09E-23 | 176 | 228 | No hit | No description |
SuperFamily | SSF57959 | 8.13E-7 | 176 | 218 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.2E-7 | 177 | 220 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 179 | 194 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.8E-29 | 256 | 328 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 490 aa Download sequence Send to blast |
MANHRVGETG LSESGPSSQP LAYGVHGIPP AATNFFDQEG AAYFGELEAA LMHGVAGIRS 60 DEDRKPFFTT RPPTLEIFPS WPMRFQQTPK GNSQPVESTD SGSAQNTISQ LDSDSPVSIK 120 ASSEQCSEQN QQQQGMIACD VPATGAAAPN HQPRTQEKRR MAGATAEKDG KILDAKTLRR 180 LAQNREAARK SRLRKKAYVQ QLESSRIKLT QLEQDLQRAR SQGLFFGGAS AGENISSAAA 240 IFDMEYDRWL DENYKHMTNL RGGLQAHLPE GDLRVIVDEC LTHYDEMFRL KGVAARADVF 300 HLITGMWTTP AERCFLWMGG FKPSELLKEI LIPQLDPLTE QQLVGICSLQ QSSQQAEEAL 360 SQGLEKLHQS LRDTVSSGSL CEGTNVGNYM DQMGVALGKL ANLEGFVRQA DNLRQQTLHQ 420 LHRILTVRQA ARSFLAIGEY HGRLRALSSL WASRPRDACI RNLITDGSAY PTTTDLQIIH 480 QPVHSHFSAF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response (By similarity). Acts as transcriptional activator in vitro (PubMed:22353606). {ECO:0000250|UniProtKB:Q7X993, ECO:0000269|PubMed:22353606}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010912286.1 | 0.0 | transcription factor TGAL5 isoform X1 | ||||
Swissprot | Q5N7C7 | 0.0 | LG2_ORYSJ; Transcription factor LG2 | ||||
TrEMBL | A0A3Q0I3P0 | 0.0 | A0A3Q0I3P0_PHODC; transcription factor TGAL5-like isoform X2 | ||||
STRING | XP_008787868.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4444 | 36 | 70 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 1e-156 | bZIP family protein |
Publications ? help Back to Top | |||
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