PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010912110.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bHLH

Protein Properties

Length: 749aa MW: 83024.9 Da PI: 5.6072

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010912110.1	genome	OG	View CDS

Signature Domain? help Back to Top

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF14709	8.9E-7	673	742	No hit	No description
SuperFamily	SSF54768	9.43E-8	673	741	No hit	No description
Gene3D	G3DSA:3.30.160.20	2.1E-4	677	741	IPR014720	Double-stranded RNA-binding domain

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence Send to blast
MWGGGAPGSM ESAAVVPMED TIDALMDYLV APLLPLRVSS QEALTDDQQE AVARQIHAVV 60 LLYNYYHRKQ FPQLEFLAFE TFCKAASVAK PSLLTYLKYM HKYDDGSGNL NKQLSITEKK 120 IMDACNISKA LDASNNAPNI EGWPTFKVAV FLIDHTKEKC LLQFGCITQG VWSLLEQELE 180 EPMDNQVAGT QINNNVSKNK EIAIRCSHGS YENDNVLQQL AFSIVEKKAG INRANICILE 240 HHLVYSLSQE KTTTRLYIMK YTETVSEGLR ELYIKDVISS LKGPLVRRAL TPEVRPVVEH 300 YNLLPYVDIL SDWLNRATLH DGSEHLPRLQ ADVNEKFSLL SDRVPTAEDP KTNNKSDWGE 360 KTVDKISNTE NGTIMKNESR TSSEFGSSKS ACRPKANACI LSVEADKLST IEDQVASDKS 420 SPNGQTVDML SNKNRIKEAV TNNIAIDGSN MSGSATVVYR PHNKAGNSPL NQYQQPSVNE 480 DTKRENNISC TSTNKWKKNN IQGTADVTLQ GCNDKVSIAD SVKPCTTKGM DGEQQGKTEM 540 GDAVEGRIPT FDLPLVPLQL NMEDQDAFQL VMASKKGDLL RASLQALQKR RDDLCQQQRI 600 LEDEIARCEM NIQTILSEGE ENSEPKVESI IEACNVLCSS QTHVDRSLCS GEGGRTQKIK 660 RKRLAEAVLK LRSSCQELDD ICCANSWILP RYSVLPSISD GRFQASVTVK GMDFECTVGG 720 DLKSSPREAR ESAATHMLSK LCSMAGQTQ

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence Send to blast

MWGGGAPGSM ESAAVVPMED TIDALMDYLV APLLPLRVSS QEALTDDQQE AVARQIHAVV  60
LLYNYYHRKQ FPQLEFLAFE TFCKAASVAK PSLLTYLKYM HKYDDGSGNL NKQLSITEKK  120
IMDACNISKA LDASNNAPNI EGWPTFKVAV FLIDHTKEKC LLQFGCITQG VWSLLEQELE  180
EPMDNQVAGT QINNNVSKNK EIAIRCSHGS YENDNVLQQL AFSIVEKKAG INRANICILE  240
HHLVYSLSQE KTTTRLYIMK YTETVSEGLR ELYIKDVISS LKGPLVRRAL TPEVRPVVEH  300
YNLLPYVDIL SDWLNRATLH DGSEHLPRLQ ADVNEKFSLL SDRVPTAEDP KTNNKSDWGE  360
KTVDKISNTE NGTIMKNESR TSSEFGSSKS ACRPKANACI LSVEADKLST IEDQVASDKS  420
SPNGQTVDML SNKNRIKEAV TNNIAIDGSN MSGSATVVYR PHNKAGNSPL NQYQQPSVNE  480
DTKRENNISC TSTNKWKKNN IQGTADVTLQ GCNDKVSIAD SVKPCTTKGM DGEQQGKTEM  540
GDAVEGRIPT FDLPLVPLQL NMEDQDAFQL VMASKKGDLL RASLQALQKR RDDLCQQQRI  600
LEDEIARCEM NIQTILSEGE ENSEPKVESI IEACNVLCSS QTHVDRSLCS GEGGRTQKIK  660
RKRLAEAVLK LRSSCQELDD ICCANSWILP RYSVLPSISD GRFQASVTVK GMDFECTVGG  720
DLKSSPREAR ESAATHMLSK LCSMAGQTQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010912110.1	0.0	uncharacterized protein LOC105038115 isoform X1
TrEMBL	A0A3Q0IL49	0.0	A0A3Q0IL49_PHODC; uncharacterized protein LOC103722106 isoform X2
STRING	XP_008790624.1	0.0	(Phoenix dactylifera)