PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010912110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | bHLH | ||||||||
Protein Properties | Length: 749aa MW: 83024.9 Da PI: 5.6072 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF14709 | 8.9E-7 | 673 | 742 | No hit | No description |
SuperFamily | SSF54768 | 9.43E-8 | 673 | 741 | No hit | No description |
Gene3D | G3DSA:3.30.160.20 | 2.1E-4 | 677 | 741 | IPR014720 | Double-stranded RNA-binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 749 aa Download sequence Send to blast |
MWGGGAPGSM ESAAVVPMED TIDALMDYLV APLLPLRVSS QEALTDDQQE AVARQIHAVV 60 LLYNYYHRKQ FPQLEFLAFE TFCKAASVAK PSLLTYLKYM HKYDDGSGNL NKQLSITEKK 120 IMDACNISKA LDASNNAPNI EGWPTFKVAV FLIDHTKEKC LLQFGCITQG VWSLLEQELE 180 EPMDNQVAGT QINNNVSKNK EIAIRCSHGS YENDNVLQQL AFSIVEKKAG INRANICILE 240 HHLVYSLSQE KTTTRLYIMK YTETVSEGLR ELYIKDVISS LKGPLVRRAL TPEVRPVVEH 300 YNLLPYVDIL SDWLNRATLH DGSEHLPRLQ ADVNEKFSLL SDRVPTAEDP KTNNKSDWGE 360 KTVDKISNTE NGTIMKNESR TSSEFGSSKS ACRPKANACI LSVEADKLST IEDQVASDKS 420 SPNGQTVDML SNKNRIKEAV TNNIAIDGSN MSGSATVVYR PHNKAGNSPL NQYQQPSVNE 480 DTKRENNISC TSTNKWKKNN IQGTADVTLQ GCNDKVSIAD SVKPCTTKGM DGEQQGKTEM 540 GDAVEGRIPT FDLPLVPLQL NMEDQDAFQL VMASKKGDLL RASLQALQKR RDDLCQQQRI 600 LEDEIARCEM NIQTILSEGE ENSEPKVESI IEACNVLCSS QTHVDRSLCS GEGGRTQKIK 660 RKRLAEAVLK LRSSCQELDD ICCANSWILP RYSVLPSISD GRFQASVTVK GMDFECTVGG 720 DLKSSPREAR ESAATHMLSK LCSMAGQTQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010912110.1 | 0.0 | uncharacterized protein LOC105038115 isoform X1 | ||||
TrEMBL | A0A3Q0IL49 | 0.0 | A0A3Q0IL49_PHODC; uncharacterized protein LOC103722106 isoform X2 | ||||
STRING | XP_008790624.1 | 0.0 | (Phoenix dactylifera) |