PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010912020.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 434aa    MW: 47318.3 Da    PI: 6.3238
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010912020.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20235284255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  XP_010912020.1 235 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 284
                     7********.**********7.....337************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.8E-33235293IPR001471AP2/ERF domain
PROSITE profilePS5103225.752235292IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-22235293IPR016177DNA-binding domain
PfamPF008473.9E-14235284IPR001471AP2/ERF domain
SMARTSM003805.5E-38235298IPR001471AP2/ERF domain
PRINTSPR003671.2E-11236247IPR001471AP2/ERF domain
CDDcd000183.20E-16243294No hitNo description
PRINTSPR003671.2E-11258274IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    Send to blast
MHHVSQSSLN GDTFIDGGSA RLNCLSLKHI PSFLYKHSSP FSYSKGLSNR FLRSWSKDFM  60
CFKLANAPDG SFSPAKTDEV EEEGMVGMMS SEMAEAMMFS GDHRSQEMST MVSALTHVIS  120
REQVPCGTAG EVVPAGHWGS VSSPPSSSSS QYSWSGQGGG AGGQMRRREE IPPELLMSYY  180
HHGYGQFGSY HGEALPNVAE QSPQSLLTTI QAPAMEESSP SAYQEAEREA APRRRYRGVR  240
QRPWGKWAAE IRDPHKAARV WLGTFDTAEA AARAYDEAAL RFRGSRAKLN FPEDVHLHLA  300
PPPAPLATSN SPATPSSDAS RDYIEYSRLL QGVGPYQRLP PTSLLDQYMS SNYSSAMASM  360
MTDGSLATPS FPTSSASSSP VFAPSSSSSS SSSPYPLFYT LEETASETRV REDGSAFQWP  420
YWTDSSRFPP PSSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-22234292160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010912020.10.0ethylene-responsive transcription factor ABR1
TrEMBLA0A2H3XMI61e-143A0A2H3XMI6_PHODC; ethylene-responsive transcription factor ERF110-like
STRINGXP_008785849.11e-144(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2495935
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.13e-15ethylene response factor 110