PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010910851.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 264aa    MW: 28521.5 Da    PI: 7.8969
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010910851.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1301.1e-09181218542
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                     k  rr+++NReAAr+sR+RKka++++Le    +L +  
  XP_010910851.1 181 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLNQLE 218
                     7889************************8655555444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-8170223No hitNo description
SMARTSM003388.5E-7177240IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.37179223IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.13E-7181223No hitNo description
CDDcd147081.51E-21181233No hitNo description
PfamPF001709.1E-7181220IPR004827Basic-leucine zipper domain
PROSITE patternPS000360184199IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MGSRRGGAGV EDVKEAAPGM PSFVSSLPGA HQIETEGNSM QPSRVSGLAA IEQSIGFRIE  60
DAVDLSRNPL FNPKSSGQSS DPLQFGAFSK PLASTDITPA AARIGSLAVL QQKGQQPNLV  120
SSSSGHIENW GESTMGDASP KTDTSTDVDT DDKNQRLEKG QAAVAAASDS SDKSKDKLDQ  180
KTLRRLAQNR EAARKSRLRK KAYVQQLESS RLKLNQLEQE LQRARQQGIF ISSSGDQSHS  240
MGGNGALAFD MEYARWLEEH HRQI
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010910851.20.0transcription factor HBP-1b(c1), partial
RefseqXP_010922090.20.0transcription factor TGA2.3
SwissprotQ415588e-99HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2H3XTA81e-153A0A2H3XTA8_PHODC; transcription factor TGA2.3-like isoform X2
STRINGXP_008788486.11e-152(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.52e-34TGACG motif-binding factor 6