PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Regulation |

Basic Information? help Back to Top

TF ID

XP_010910851.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 264aa MW: 28521.5 Da PI: 7.8969

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010910851.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30	1.1e-09	181	218	5	42
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 k rr+++NReAAr+sR+RKka++++Le +L + XP_010910851.1 181 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLNQLE 218 7889************************8655555444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.2E-8	170	223	No hit	No description
SMART	SM00338	8.5E-7	177	240	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.37	179	223	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.13E-7	181	223	No hit	No description
CDD	cd14708	1.51E-21	181	233	No hit	No description
Pfam	PF00170	9.1E-7	181	220	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	184	199	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence Send to blast
MGSRRGGAGV EDVKEAAPGM PSFVSSLPGA HQIETEGNSM QPSRVSGLAA IEQSIGFRIE 60 DAVDLSRNPL FNPKSSGQSS DPLQFGAFSK PLASTDITPA AARIGSLAVL QQKGQQPNLV 120 SSSSGHIENW GESTMGDASP KTDTSTDVDT DDKNQRLEKG QAAVAAASDS SDKSKDKLDQ 180 KTLRRLAQNR EAARKSRLRK KAYVQQLESS RLKLNQLEQE LQRARQQGIF ISSSGDQSHS 240 MGGNGALAFD MEYARWLEEH HRQI

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010910851.2	0.0	transcription factor HBP-1b(c1), partial
Refseq	XP_010922090.2	0.0	transcription factor TGA2.3
Swissprot	Q41558	8e-99	HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBL	A0A2H3XTA8	1e-153	A0A2H3XTA8_PHODC; transcription factor TGA2.3-like isoform X2
STRING	XP_008788486.1	1e-152	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.5	2e-34	TGACG motif-binding factor 6