PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010910555.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | NAC | ||||||||
Protein Properties | Length: 132aa MW: 15465.4 Da PI: 8.4649 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 40.7 | 7.2e-13 | 69 | 124 | 73 | 128 |
NAM 73 rknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 r + +g Wk+t +++++ + +ge vg k+ + fy+ + + ++t+Wvm+ey+l XP_010910555.1 69 RDRHtLDGTGKWKSTNTQTPIRE-NGEIVGYKQHFRFYRREPGREVSTTWVMDEYTL 124 33332235799***********9.999************999999**********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 15.203 | 1 | 132 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.3E-8 | 4 | 124 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.29E-16 | 68 | 129 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence Send to blast |
MADQQILECL HRHVNNWGHL SSGLNVVEND FINNFKVEPP PDVRNLGTLG KLYCLVNCFY 60 KPQSGPLTRD RHTLDGTGKW KSTNTQTPIR ENGEIVGYKQ HFRFYRREPG REVSTTWVMD 120 EYTLYSKEYR NT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | XP_008780765.1 | 2e-29 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP21061 | 2 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12977.1 | 2e-06 | NAC family protein |