PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_010909999.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 292aa MW: 31498.2 Da PI: 7.0715 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 129 | 1.4e-40 | 37 | 98 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +++alkcprCdstntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss XP_010909999.1 37 PDQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKGCRRYWTQGGSLRNVPVGGGSRKNKRSSS 98 6899******************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-23 | 28 | 86 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.9E-34 | 38 | 95 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.376 | 41 | 95 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 43 | 79 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 292 aa Download sequence Send to blast |
MEVFNVHDQA TASYPLEEVL VCSKTQQPPE RKLRPHPDQA LKCPRCDSTN TKFCYYNNYS 60 LSQPRYFCKG CRRYWTQGGS LRNVPVGGGS RKNKRSSSSS SKRIADQDPT ANSNPVLPGL 120 IPPPLSFDPS DLTLAFASLH KQPTPIQSGL DDHDAFLLGN PNHNPNASSV PTAPNDGFLD 180 ILRSGFLDTT GPSGIYNLYY GFGGNGNVEV GGSGDEVMLP LEGGFGGATT TTSQGSCKFM 240 DGGENKLLMG IQWPVEGDGK MAMESGRDVW NGVGSSWHGL INSSLMKRGT GW |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010909999.1 | 0.0 | dof zinc finger protein DOF2.1 isoform X2 | ||||
TrEMBL | A0A2H3XHE3 | 1e-140 | A0A2H3XHE3_PHODC; dof zinc finger protein DOF2.1 | ||||
STRING | XP_008802348.1 | 1e-159 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4704 | 32 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24060.1 | 8e-32 | Dof family protein |