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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010909980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | GeBP | ||||||||
Protein Properties | Length: 190aa MW: 21538.4 Da PI: 10.5417 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 42.8 | 1.4e-13 | 75 | 165 | 4 | 97 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsk.sqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 r+w++ De++lL++ i f++++g+ p +i +f++fv+ s+ ++ + +q+ +K++rL +K+ +k + + +hd+ + el+ ++W XP_010909980.1 75 LRVWTDADEVALLRAAILFRDERGSLPGRsNILDFFNFVQPSLLTQIRNpEQVRSKLKRLHRKYFDKPWG-----PAASAGAHDRLVHELAGQLW 164 59***********************88766************999986538*************998777.....45677889999999998888 PP DUF573 97 g 97 XP_010909980.1 165 S 165 6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 7.9E-12 | 76 | 165 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence Send to blast |
MDEHPELPQA KSKKKKKDKK QQQQPPEVPK PTTAQEHAAA DAVPSKDRRK KRKTTDPPSL 60 APAKETTSFC PRQQLRVWTD ADEVALLRAA ILFRDERGSL PGRSNILDFF NFVQPSLLTQ 120 IRNPEQVRSK LKRLHRKYFD KPWGPAASAG AHDRLVHELA GQLWSSQLET FAEKQDEASR 180 GSLESKEAGR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010909980.1 | 1e-136 | probable transcription factor At2g01370 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2682 | 27 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01370.1 | 4e-08 | DNA-binding storekeeper protein-related transcriptional regulator |