PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909853.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 452aa    MW: 49234.7 Da    PI: 6.3192
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909853.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.70.000113463781754
                     HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++   L++l+ +      +K + a++L +A+eYIk L
  XP_010909853.1 346 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKFL 378
                     55666677777776.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.668329378IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-11339394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-7339387IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.29E-5339382No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042631Biological Processcellular response to water deprivation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071472Biological Processcellular response to salt stress
GO:2000214Biological Processregulation of proline metabolic process
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MAEEFQTGIC SSGSWWSTAR TGSFDGPMLS TSVSCSTEFT GIGGSFNWPV AADAVEAESR  60
SSDESPGSVS INSSITFQDT HKPQASDPLV ADPLMDSTLQ IPGFGLSSPS INWHQPFFTT  120
AGRAETNLHA LLQEDMNSRP NHPQEPVIES NQTHMNVESS SFNLLKDLNQ GLIQDQHHFS  180
SGVNGYPFFP TSFGLPPTLL QGLFEPELKP QQSFSNQQMN SSLSYQGGLN ESLQSQAAKL  240
PQFNMALPLK QQFHFTNSTP FWNPSATATN ETTSSLYSST PTQIAPHAFK GKTNCNNLPV  300
KSNSEGAGVS SSNAIKKSST EQAFKKPRIE TPSPLPTFKV RKEKLGDRVT ALQQLVSPFG  360
KTDTASVLHE AIEYIKFLHE QVGVLSAPYW KNGHQSQHSQ NLDKTKDGEG PKLDLKSRGL  420
CLVPMSSTFA VASETPVDFW TPTFGGTYRC KV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909853.10.0transcription factor bHLH112 isoform X1
TrEMBLA0A3Q0IGD50.0A0A3Q0IGD5_PHODC; transcription factor bHLH112-like
STRINGXP_008810246.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22163787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.15e-62bHLH family protein