PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909377.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 500aa    MW: 54236.7 Da    PI: 7.3562
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909377.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.21.1e-30266324259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+
  XP_010909377.1 266 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDKTILITTYEGTHNHP 324
                     7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.5E-33250326IPR003657WRKY domain
SuperFamilySSF1182909.94E-28258326IPR003657WRKY domain
PROSITE profilePS5081129.459260326IPR003657WRKY domain
SMARTSM007741.5E-36265325IPR003657WRKY domain
PfamPF031061.2E-26267324IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MERPKEMALL YSDSFSSHER GCSVDEGIDR RDGIEEVDFF SESHRRDNHG GDARAGVSHD  60
PRGENVSPQE DTSINTALHL LTMSSRVGQG AEEEKKPNNK LAMLQGELNR LGEENRRLRI  120
MLEQLTRSYG VLHNEYILAM QQRAQDFRHG QDNKTDTSSP VAVSEHQFME RGQTSMQNFG  180
HSGAEDEEQS QSLSNNIVNR GSREQGIIPL TKRQLPVDDG PSEQRSPSWG SNKNPRLMQD  240
TSTDTELPCR KARVSVRARS DAPMITDGCQ WRKYGQKMAK GNPCPRAYYR CTMAVGCPVR  300
KQVQRCAEDK TILITTYEGT HNHPLPQTAA AMANTTSAAA AMLLSGSTTS KDSLMTPGGF  360
FQSVPYASTM ATLSASAPFP TITLDLTQSP SPLQLSRGHL PSIPFSMPPS MYLPHKLLPG  420
VVGPPAVQFG PRQQSMVETV TAAIAADPNF TTALAAAIKS IMGSPPSTNG PGGSNGSPSG  480
PQVGPGPPQL PQSCTTFSTK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-20252326174WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909377.10.0probable WRKY transcription factor 47
TrEMBLA0A199V8X61e-150A0A199V8X6_ANACO; WRKY transcription factor 6
STRINGEOX954651e-142(Theobroma cacao)
STRINGXP_002515176.11e-143(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43583260
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01720.12e-72WRKY family protein