PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 398aa MW: 43787.4 Da PI: 6.1234

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010909006.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.2	4.7e-10	200	258	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r+ NR +A rs +RK +i eLe+ v++L++ ++L +l +l+ l++e+ XP_010909006.1 200 KRAKRMWANRQSAARSKERKMRYISELERQVQSLQTDATTLSAQLTMLQRDTNGLTAEN 258 9**********************************************999888887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.6E-16	196	260	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.852	198	261	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.8E-10	200	254	No hit	No description
Pfam	PF00170	1.8E-8	200	254	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.49E-11	200	251	No hit	No description
CDD	cd14703	3.29E-23	201	250	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence Send to blast
MDKGKAPVHG EGAGSPPHSS RFSASFSPFS SNFPELGDPL RSSSSQPIQE SSQDVSLMPD 60 FLPRNLGHRR AHSDILGLPD DISFYSDLGV VGSHDDIDDD LLSAYFDNEN FNSPPPSSSG 120 PSCGEPSGLA AAPPAPLQTE NLVSASNERP GAGHQHSQSM DGSFSVLLGT SGEGPGLTPA 180 EMKKAVEDAK LADLALVDPK RAKRMWANRQ SAARSKERKM RYISELERQV QSLQTDATTL 240 SAQLTMLQRD TNGLTAENSE LKLQLQTMEQ QVHFQDALND ALQEEVQRLK LATGQLMPNG 300 GPMMNFGHPS FGASQQFYHH NQSMQSLMAA QQFQQLHIHS QHQQQLHQLQ PLQQQQLHLH 360 QHQQGQQQPP VDLRMKGPMT YQNKRAEGPS DNNNNQRE

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence Send to blast

MDKGKAPVHG EGAGSPPHSS RFSASFSPFS SNFPELGDPL RSSSSQPIQE SSQDVSLMPD  60
FLPRNLGHRR AHSDILGLPD DISFYSDLGV VGSHDDIDDD LLSAYFDNEN FNSPPPSSSG  120
PSCGEPSGLA AAPPAPLQTE NLVSASNERP GAGHQHSQSM DGSFSVLLGT SGEGPGLTPA  180
EMKKAVEDAK LADLALVDPK RAKRMWANRQ SAARSKERKM RYISELERQV QSLQTDATTL  240
SAQLTMLQRD TNGLTAENSE LKLQLQTMEQ QVHFQDALND ALQEEVQRLK LATGQLMPNG  300
GPMMNFGHPS FGASQQFYHH NQSMQSLMAA QQFQQLHIHS QHQQQLHQLQ PLQQQQLHLH  360
QHQQGQQQPP VDLRMKGPMT YQNKRAEGPS DNNNNQRE

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor with an activatory role.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010909006.1	0.0	transcription factor RF2a-like
Swissprot	Q04088	1e-109	POF21_ARATH; Probable transcription factor PosF21
TrEMBL	A0A2H3XSP8	0.0	A0A2H3XSP8_PHODC; transcription factor RF2a-like
STRING	XP_008788212.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4269	38	68

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-103	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Xu C, et al. Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration. Nat Plants, 2018. 4(2): p. 108-115 [PMID:29358751]